C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homeo box B1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000110682 hoxb1a-001 ENSDARG00000008174 7955 + 3:24060139-24062383 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyMuscleENSDART00000110682
Transcript ID Kidney Muscle
ENSDART00000110682 1.916±0.00 0.048±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0021561 IMP facial nerve development
GO:0021570 IDA rhombomere 4 development
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061745 Hoxd10-001 protein_coding Mus_musculus 0.00000000009 73
ENST00000249501 HOXD10-001 protein_coding Homo_sapiens 0.0000000001 73
ENST00000490088 HOXD10-002 processed_transcript Homo_sapiens 0.00000000005 73
ENST00000549469 HOXD10-003 processed_transcript Homo_sapiens 0.00000000004 73

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