C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homeobox D10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000549469 HOXD10-003 ENSG00000128710 9606 + 2:176108877-176119243 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastLungOvaryPlacentaENST00000549469
Transcript ID Bladder Breast Lung Ovary Placenta
ENST00000549469 2.852±0.00 0.197±0.00 0.082±0.00 0.915±0.00 0.209±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0001 UCNEbase 2:175103181-177219808
CIL_00090A CIL_00090A_0001 VISTA 2:175589301-176190657
CIL_0008JZ CIL_0008JZ_0001 VISTA 2:175775342-176376682
CIL_0001HF CIL_0001HF_0001 CGP 2:176099730-176109754
CIL_00017N CIL_00017N_0001 CGP 2:176104216-176119942
CIL_00017O CIL_00017O_0001 CGP 2:176108790-176124937

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048086 Hoxd11-002 processed_transcript Mus_musculus 0 652
ENSMUST00000061745 Hoxd10-001 protein_coding Mus_musculus 0 507
ENSMUST00000142312 Hoxd11-001 protein_coding Mus_musculus 0 414
ENSDART00000110682 hoxb1a-001 protein_coding Danio_rerio 0.00000000004 73

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