C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cadherin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000111441 cdh5-202 ENSDARG00000075549 7955 + 7:45433470-45486203 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverENSDART00000111441
Transcript ID Brain Heart Kidney Liver
ENSDART00000111441 3.741±1.76 15.783±5.13 2.046±0.00 0.909±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SB CIL_0006SB_0001 CGP 7:44733496-45486203
CIL_0003BQ CIL_0003BQ_0001 CGP 7:45433470-45568430

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002040 IMP sprouting angiogenesis
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007155 IEA cell adhesion
GO:0007156 IEA homophilic cell adhesion
GO:0007507 IMP heart development
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016525 IMP negative regulation of angiogenesis
GO:0072554 IMP blood vessel lumenization
GO:1902354 IMP blood vessel endothelial cell delamination involved in blood vessel lumen ensheathment
GO:1902355 IMP endothelial tube lumen extension involved in blood vessel lumen ensheathment

Homologs

No Homologs available.

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