C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003BQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075549-ENSDARG00000087413 CGP 7955 7:45433470-45568430
GeneTranscriptPositionBiotype
ENSDARG00000075549 (cdh5)
cadherin 5
ENSDART00000108766 (cdh5-201) 45433470-45455664 protein_coding
ENSDART00000111441 (cdh5-202) 45433470-45486203 protein_coding
ENSDARG00000087413 (BEAN1)
brain expressed, associated with NEDD4, 1
ENSDART00000121826 (BEAN1-201) 45472800-45568430 protein_coding
CIL_0003BQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000179776-ENSG00000166546 CGP 9606 16:66366622-66493529
GeneTranscriptPositionBiotype
ENSG00000179776 (CDH5)
cadherin 5, type 2 (vascular endothelium)
ENST00000341529 (CDH5-001) 66366630-66404786 protein_coding
ENST00000539168 (CDH5-002) 66395455-66403335 protein_coding
ENST00000562048 (CDH5-005) 66376341-66386992 protein_coding
ENST00000563425 (CDH5-007) 66379225-66392985 protein_coding
ENST00000565334 (CDH5-008) 66366690-66403408 nonsense_mediated_decay
ENST00000568023 (CDH5-003) 66377209-66379389 protein_coding
ENST00000568155 (CDH5-004) 66376390-66386827 protein_coding
ENST00000614547 (CDH5-201) 66366622-66404782 protein_coding
ENSG00000246898 (LINC00920)
long intergenic non-protein coding RNA 920
ENST00000499966 (LINC00920-001) 66408524-66412135 lincRNA
ENSG00000260146 (CTD-2258A20.3)
ENST00000566896 (CTD-2258A20.3-001) 66450998-66451351 processed_pseudogene
CIL_0003BQ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031871-ENSMUSG00000031872 CGP 10090 8:104101625-104219092
GeneTranscriptPositionBiotype
ENSMUSG00000031871 (Cdh5)
cadherin 5
ENSMUST00000034339 (Cdh5-201) 104101625-104144502 protein_coding
ENSMUSG00000031872 (Bean1)
brain expressed, associated with Nedd4, 1
ENSMUST00000093245 (Bean1-201) 104170513-104219092 protein_coding
ENSMUST00000164076 (Bean1-202) 104170513-104219092 protein_coding
ENSMUST00000167633 (Bean1-203) 104170513-104219092 protein_coding
ENSMUST00000171018 (Bean1-204) 104170513-104219092 protein_coding
ENSMUSG00000074128 (Gm10631)
predicted gene 10631
ENSMUST00000153288 (Gm10631-001) 104177795-104184599 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003BQ_0001ENSDARG00000075549ENSDART00000108766ENSDART00000111441ENSDARG00000087413ENSDART00000121826CIL_0003BQ_0002ENSG00000179776ENST00000341529ENST00000539168ENST00000562048ENST00000563425ENST00000565334ENST00000568023ENST00000568155ENST00000614547ENSG00000246898ENST00000499966ENSG00000260146ENST00000566896CIL_0003BQ_0003ENSMUSG00000031871ENSMUST00000034339ENSMUSG00000031872ENSMUST00000093245ENSMUST00000164076ENSMUST00000167633ENSMUST00000171018ENSMUSG00000074128ENSMUST00000153288
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003BQ_0001ENSDARG00000075549ENSDART00000108766ENSDART00000111441ENSDARG00000087413ENSDART00000121826CIL_0003BQ_0002ENSG00000179776ENST00000341529ENST00000563425ENST00000565334ENST00000614547ENSG00000246898ENST00000499966ENSG00000260146ENST00000566896CIL_0003BQ_0003ENSMUSG00000031871ENSMUST00000034339ENSMUSG00000031872ENSMUST00000093245ENSMUST00000164076ENSMUST00000167633ENSMUST00000171018ENSMUSG00000074128ENSMUST00000153288
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075549 ENSDART00000108766 N/A N/A N/A 1.228±0.00 N/A N/A 36.910±27.28 9.362±7.44 N/A N/A N/A N/A N/A N/A
ENSDART00000111441 N/A N/A N/A 3.741±1.76 N/A N/A 15.783±5.13 2.046±0.00 0.909±0.00 N/A N/A N/A N/A N/A
ENSDARG00000087413 ENSDART00000121826 N/A N/A N/A 5.107±0.00 N/A N/A 0.580±0.04 N/A 0.046±0.00 N/A 0.195±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000179776 ENST00000341529 49.075±0.00 16.693±0.00 0.638±0.00 3.378±3.12 17.177±14.56 9.420±8.70 13.172±11.88 6.447±2.67 1.873±0.14 7.120±0.00 8.076±0.00 4.893±1.96 103.766±57.39 10.774±0.00
ENST00000539168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563425 N/A N/A N/A N/A 1.876±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565334 N/A N/A 1.438±0.00 0.864±0.00 N/A 1.161±0.00 1.436±0.00 N/A 1.371±0.00 N/A 2.457±0.00 2.098±0.00 N/A N/A
ENST00000568023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614547 16.335±0.00 9.451±0.00 N/A N/A 7.435±0.00 N/A 1.387±0.00 N/A 1.619±0.00 18.198±0.00 2.513±0.00 2.059±0.00 55.554±0.00 3.908±1.08
ENSG00000246898 ENST00000499966 0.090±0.00 0.334±0.00 0.022±0.00 0.314±0.08 0.238±0.08 0.251±0.09 0.124±0.06 0.660±0.00 0.083±0.01 0.307±0.07 N/A 0.413±0.19 0.236±0.10 0.225±0.10
ENSG00000260146 ENST00000566896 N/A N/A N/A 0.778±0.00 N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A 0.110±0.00 0.141±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031871 ENSMUST00000034339 76.954±26.45 32.084±2.87 9.001±2.02 5.169±1.95 35.911±8.57 8.664±0.42 36.311±1.93 19.055±0.51 7.139±2.64 247.550±18.17 13.927±3.77 27.202±3.27 174.271±105.62 1.139±0.47
ENSMUSG00000031872 ENSMUST00000093245 0.350±0.15 1.319±0.51 2.503±0.29 1.642±0.95 0.171±0.05 1.355±0.18 0.416±0.15 0.108±0.02 0.026±0.01 0.075±0.00 0.039±0.03 2.701±0.63 0.221±0.10 1.089±0.00
ENSMUST00000164076 0.564±0.36 1.533±0.45 1.975±0.28 1.387±0.68 0.211±0.06 1.726±0.84 0.472±0.09 0.104±0.00 0.015±0.01 0.138±0.06 0.004±0.00 3.921±0.76 0.160±0.09 3.227±0.74
ENSMUST00000167633 N/A N/A N/A N/A N/A N/A 0.159±0.03 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171018 N/A N/A N/A N/A 0.268±0.00 N/A N/A N/A N/A N/A N/A 0.855±0.00 0.307±0.00 0.195±0.00
ENSMUSG00000074128 ENSMUST00000153288 N/A N/A N/A N/A N/A 0.149±0.00 N/A N/A 0.042±0.00 N/A N/A 0.153±0.05 N/A 0.786±0.04

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