C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin specific peptidase 12a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000112670 usp12a-001 ENSDARG00000078109 7955 - 24:22208268-22228264 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000112670
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000112670 10.422±8.35 3.549±2.27 3.312±0.78 0.825±0.00 4.323±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000G9 CIL_0000G9_0001 CGP 24:22192022-22228264
CIL_0000GA CIL_0000GA_0001 CGP 24:22208268-22233473

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004197 ISS cysteine-type endopeptidase activity
GO:0004221 IEA ubiquitin thiolesterase activity
GO:0004843 ISS ubiquitin-specific protease activity
GO:0006508 IEA proteolysis
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008233 IEA peptidase activity
GO:0008234 IEA cysteine-type peptidase activity
GO:0016579 ISS protein deubiquitination
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068058 Usp46-001 protein_coding Mus_musculus 0 499
ENSMUST00000119154 Usp46-002 protein_coding Mus_musculus 0 433
ENSMUST00000128750 Usp46-003 processed_transcript Mus_musculus 0 435

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