C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane anterior posterior transformation 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000113285 TAPT1 (2 of 2)-201 ENSDARG00000073999 7955 - 14:49565623-49611461 protein_coding

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000113285
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000113285 1.854±1.07 1.145±0.52 0.687±0.36 0.736±0.00 0.333±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033V CIL_00033V_0002 CGP 14:49391773-49611461
CIL_00033W CIL_00033W_0002 CGP 14:49565623-49768506

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000405303 TAPT1-001 protein_coding Homo_sapiens 0 632
ENST00000505152 TAPT1-015 processed_transcript Homo_sapiens 0 283
ENST00000505317 TAPT1-004 retained_intron Homo_sapiens 1e-28 132
ENST00000505603 TAPT1-002 nonsense_mediated_decay Homo_sapiens 0 593
ENST00000507425 TAPT1-007 retained_intron Homo_sapiens 0 372
ENST00000508888 TAPT1-014 processed_transcript Homo_sapiens 0 326
ENST00000510868 TAPT1-013 processed_transcript Homo_sapiens 0 289
ENST00000513359 TAPT1-006 processed_transcript Homo_sapiens 0 326
ENST00000513782 TAPT1-005 nonsense_mediated_decay Homo_sapiens 0 204
ENST00000513833 TAPT1-018 nonsense_mediated_decay Homo_sapiens 0 195

Loading