C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00033V_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000034007-ENSDARG00000061143 CGP 7955 1:21487025-21577241
GeneTranscriptPositionBiotype
ENSDARG00000034007 (prom1b)
prominin 1 b 		ENSDART00000045368 (prom1b-201) 21487025-21531238 protein_coding
ENSDART00000134719 (prom1b-001) 21487025-21531239 protein_coding
ENSDART00000134831 (prom1b-003) 21504467-21510018 protein_coding
ENSDART00000140920 (prom1b-002) 21495082-21500327 protein_coding
ENSDARG00000061143 (tapt1b)
transmembrane anterior posterior transformation 1b 		ENSDART00000086867 (tapt1b-001) 21544349-21577241 protein_coding

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CIL_00033V_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000039966-ENSDARG00000073999 CGP 7955 14:49391773-49611461
GeneTranscriptPositionBiotype
ENSDARG00000039966 (prom1a)
prominin 1a 		ENSDART00000105417 (prom1a-201) 49391773-49551953 protein_coding
ENSDART00000105418 (prom1a-001) 49394596-49552168 protein_coding
ENSDART00000133947 (prom1a-002) 49394923-49398131 processed_transcript
ENSDARG00000073999 (TAPT1 (2 of 2))
transmembrane anterior posterior transformation 1 		ENSDART00000113285 (TAPT1 (2 of 2)-201) 49565623-49611461 protein_coding

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CIL_00033V_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000007062-ENSG00000169762 CGP 9606 4:15963076-16227410
GeneTranscriptPositionBiotype
ENSG00000007062 (PROM1)
prominin 1 		ENST00000447510 (PROM1-201) 15968226-16076118 protein_coding
ENST00000502501 (PROM1-008) 16076059-16083658 processed_transcript
ENST00000502943 (PROM1-007) 16018301-16038014 processed_transcript
ENST00000503884 (PROM1-019) 15963076-15984303 nonsense_mediated_decay
ENST00000504842 (PROM1-013) 16075975-16080700 processed_transcript
ENST00000505450 (PROM1-001) 15968228-16084378 protein_coding
ENST00000508167 (PROM1-003) 15968230-16083732 protein_coding
ENST00000508322 (PROM1-010) 16075734-16083465 protein_coding
ENST00000508940 (PROM1-009) 16075786-16083465 protein_coding
ENST00000510224 (PROM1-004) 15968234-16083701 protein_coding
ENST00000511153 (PROM1-005) 16003267-16075778 nonsense_mediated_decay
ENST00000511270 (PROM1-017) 15985511-15986037 processed_transcript
ENST00000512304 (PROM1-012) 16076566-16080700 processed_transcript
ENST00000513108 (PROM1-014) 16075999-16080688 processed_transcript
ENST00000513448 (PROM1-002) 15968230-15971945 retained_intron
ENST00000513946 (PROM1-018) 15969092-15985790 protein_coding
ENST00000514693 (PROM1-015) 16076441-16080677 processed_transcript
ENST00000514967 (PROM1-011) 16075864-16082608 protein_coding
ENST00000539194 (PROM1-202) 15968226-16076118 protein_coding
ENST00000540805 (PROM1-203) 15968226-16076118 protein_coding
ENSG00000137441 (FGFBP2)
fibroblast growth factor binding protein 2 		ENST00000259989 (FGFBP2-001) 15960243-15963236 protein_coding
ENST00000509331 (FGFBP2-002) 15960248-15969309 processed_transcript
ENSG00000169762 (TAPT1)
transmembrane anterior posterior transformation 1 		ENST00000405303 (TAPT1-001) 16160505-16226541 protein_coding
ENST00000488714 (TAPT1-016) 16176151-16176790 processed_transcript
ENST00000503858 (TAPT1-017) 16163252-16166872 retained_intron
ENST00000504281 (TAPT1-009) 16179490-16186814 retained_intron
ENST00000505152 (TAPT1-015) 16188223-16214633 processed_transcript
ENST00000505317 (TAPT1-004) 16190339-16226449 retained_intron
ENST00000505603 (TAPT1-002) 16163261-16226471 nonsense_mediated_decay
ENST00000507425 (TAPT1-007) 16179393-16191448 retained_intron
ENST00000507728 (TAPT1-008) 16166673-16175041 retained_intron
ENST00000508886 (TAPT1-010) 16163368-16174548 retained_intron
ENST00000508888 (TAPT1-014) 16186781-16216170 processed_transcript
ENST00000510868 (TAPT1-013) 16188217-16226030 processed_transcript
ENST00000511156 (TAPT1-012) 16202539-16226060 processed_transcript
ENST00000511866 (TAPT1-011) 16188232-16196723 processed_transcript
ENST00000513359 (TAPT1-006) 16186781-16227410 processed_transcript
ENST00000513782 (TAPT1-005) 16163296-16191484 nonsense_mediated_decay
ENST00000513833 (TAPT1-018) 16188275-16202582 nonsense_mediated_decay
ENSG00000249234 (RP11-452J21.2)
 ENST00000513586 (RP11-452J21.2-001) 16178939-16183120 antisense
ENSG00000263327 (TAPT1-AS1)
TAPT1 antisense RNA 1 (head to head) 		ENST00000570786 (TAPT1-AS1-002) 16227045-16258187 antisense
ENST00000573308 (TAPT1-AS1-003) 16226685-16256744 antisense
ENST00000573950 (TAPT1-AS1-004) 16227007-16320140 antisense

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033V_0001ENSDARG00000034007ENSDART00000045368ENSDART00000134719ENSDART00000134831ENSDART00000140920ENSDARG00000061143ENSDART00000086867CIL_00033V_0002ENSDARG00000039966ENSDART00000105417ENSDART00000105418ENSDART00000133947ENSDARG00000073999ENSDART00000113285CIL_00033V_0003ENSG00000007062ENST00000447510ENST00000502501ENST00000502943ENST00000503884ENST00000504842ENST00000505450ENST00000508167ENST00000508322ENST00000508940ENST00000510224ENST00000511153ENST00000511270ENST00000512304ENST00000513108ENST00000513448ENST00000513946ENST00000514693ENST00000514967ENST00000539194ENST00000540805ENSG00000137441ENST00000259989ENST00000509331ENSG00000169762ENST00000405303ENST00000488714ENST00000503858ENST00000504281ENST00000505152ENST00000505317ENST00000505603ENST00000507425ENST00000507728ENST00000508886ENST00000508888ENST00000510868ENST00000511156ENST00000511866ENST00000513359ENST00000513782ENST00000513833ENSG00000249234ENST00000513586ENSG00000263327ENST00000570786ENST00000573308ENST00000573950
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033V_0001ENSDARG00000034007ENSDART00000045368ENSDART00000134719ENSDARG00000061143ENSDART00000086867CIL_00033V_0002ENSDARG00000039966ENSDART00000105417ENSDARG00000073999ENSDART00000113285CIL_00033V_0003ENSG00000007062ENST00000447510ENST00000502943ENST00000505450ENST00000508167ENST00000513448ENST00000539194ENST00000540805ENSG00000137441ENST00000259989ENSG00000169762ENST00000405303ENST00000503858ENST00000505603ENST00000508886ENST00000513359ENST00000513782ENSG00000249234ENST00000513586ENSG00000263327ENST00000570786ENST00000573308ENST00000573950
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000034007 ENSDART00000045368 N/A N/A N/A N/A N/A N/A 0.199±0.05 0.018±0.00 N/A N/A 0.030±0.00 N/A N/A N/A
ENSDART00000134719 N/A N/A N/A 1.668±0.45 N/A N/A 0.200±0.05 0.018±0.00 N/A N/A 0.030±0.00 N/A N/A N/A
ENSDART00000134831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140920 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000061143 ENSDART00000086867 N/A N/A N/A 12.300±5.91 N/A N/A 4.668±1.82 8.277±2.13 2.818±0.00 N/A 2.373±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000039966 ENSDART00000105417 N/A N/A N/A 8.587±2.99 N/A N/A 0.541±0.18 0.464±0.16 0.101±0.00 N/A 0.620±0.00 N/A N/A N/A
ENSDART00000105418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000133947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000073999 ENSDART00000113285 N/A N/A N/A 1.854±1.07 N/A N/A 1.145±0.52 0.687±0.36 0.736±0.00 N/A 0.333±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000007062 ENST00000447510 N/A N/A N/A N/A N/A N/A 0.214±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000502501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502943 N/A N/A N/A N/A N/A N/A N/A 0.994±0.00 N/A N/A 0.100±0.00 9.080±0.00 8.091±0.00 6.465±0.00
ENST00000503884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505450 N/A 0.082±0.00 3.627±0.00 0.314±0.00 2.164±0.00 9.315±0.00 0.355±0.00 N/A 0.267±0.00 1.030±0.00 N/A 2.055±1.74 1.733±0.00 N/A
ENST00000508167 N/A N/A N/A N/A 3.416±0.00 1.333±0.00 N/A 9.757±0.00 0.445±0.04 1.990±0.00 N/A 2.652±2.32 8.096±2.51 1.403±0.00
ENST00000508322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512304 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513108 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513448 N/A N/A N/A N/A 2.225±0.00 N/A N/A N/A N/A N/A 0.127±0.06 1.183±0.00 N/A N/A
ENST00000513946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514967 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539194 N/A N/A N/A 0.255±0.03 1.085±0.00 N/A N/A N/A N/A 0.793±0.00 N/A N/A N/A N/A
ENST00000540805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.494±0.23
ENSG00000137441 ENST00000259989 13.131±0.00 0.435±0.00 N/A N/A 7.432±0.00 5.154±0.00 3.331±0.00 0.445±0.00 N/A 11.378±0.00 0.270±0.00 N/A N/A 4.812±0.00
ENST00000509331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169762 ENST00000405303 1.928±0.00 N/A 0.920±0.00 1.710±0.63 0.730±0.00 1.131±0.32 N/A 1.595±0.46 0.804±0.17 0.615±0.02 0.888±0.00 0.883±0.46 1.328±0.28 3.349±0.00
ENST00000488714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.971±0.00 8.469±0.00 61.071±0.00
ENST00000504281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505603 N/A N/A N/A 3.044±1.44 1.955±0.00 1.275±0.00 3.241±2.54 6.234±0.00 2.015±0.03 N/A 3.949±1.40 0.981±0.00 1.541±0.20 6.500±0.00
ENST00000507425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507728 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.928±0.00 N/A N/A N/A
ENST00000508888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513359 N/A N/A 2.741±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513782 N/A N/A N/A N/A N/A 1.851±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249234 ENST00000513586 0.089±0.00 0.182±0.00 N/A 0.127±0.00 0.189±0.10 N/A 0.254±0.23 0.059±0.00 N/A N/A N/A N/A N/A 0.171±0.04
ENSG00000263327 ENST00000570786 0.090±0.00 0.660±0.00 N/A 0.077±0.00 0.411±0.02 0.618±0.10 0.134±0.00 N/A 0.218±0.00 1.981±0.00 0.138±0.00 0.709±0.23 0.299±0.16 0.751±0.08
ENST00000573308 N/A N/A N/A N/A N/A N/A 0.225±0.00 N/A N/A N/A 0.191±0.00 N/A N/A N/A
ENST00000573950 N/A N/A N/A 0.058±0.00 1.647±0.00 N/A N/A N/A N/A N/A N/A 1.321±0.00 N/A N/A

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