Transcript ID | Brain | Breast | Colon | Heart | Kidney | Liver | Lung | Muscle | Ovary |
---|---|---|---|---|---|---|---|---|---|
ENST00000348544 | 2.636±0.00 | 2.568±0.00 | 3.026±0.00 | 3.023±0.00 | 2.001±0.00 | 2.969±0.00 | 2.626±0.00 | 2.006±0.00 | 3.367±0.00 |
Transcript Info |
||||||
Description: | vacuolar protein sorting 39 homolog (S. cerevisiae) | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000348544 | VPS39-002 | ENSG00000166887 | 9606 | - | 15:42160754-42208153 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0005PN | CIL_0005PN_0001 | CGP | 15:42139034-42208316 |
CIL_0005PM | CIL_0005PM_0001 | CGP | 15:42158701-42273663 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0005083 | IEA | small GTPase regulator activity |
GO:0005515 | IEA | protein binding |
GO:0005765 | IDA | lysosomal membrane |
GO:0005768 | IEA | endosome |
GO:0006886 | IEA | intracellular protein transport |
GO:0016192 | IEA | vesicle-mediated transport |
GO:0030897 | IDA | HOPS complex |
GO:0050790 | IEA | regulation of catalytic activity |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000102501 | Vps39-001 | protein_coding | Mus_musculus | 0 | 3618 |
ENSMUST00000129857 | Vps39-003 | processed_transcript | Mus_musculus | 0 | 3373 |
ENSMUST00000028752 | Vps39-002 | protein_coding | Mus_musculus | 0 | 3373 |
ENSMUST00000147085 | Vps39-004 | retained_intron | Mus_musculus | 0 | 1696 |
ENSDART00000113644 | vps39-201 | protein_coding | Danio_rerio | 0 | 1347 |
ENSDART00000156303 | vps39-001 | protein_coding | Danio_rerio | 0 | 1347 |
ENSMUST00000138854 | Vps39-008 | processed_transcript | Mus_musculus | 0 | 758 |
ENSMUST00000156296 | Vps39-006 | processed_transcript | Mus_musculus | 0 | 492 |
ENSMUST00000132476 | Vps39-009 | retained_intron | Mus_musculus | 0 | 424 |
ENSMUST00000145193 | Vps39-005 | retained_intron | Mus_musculus | 0 | 387 |
ENSMUST00000133260 | Vps39-010 | retained_intron | Mus_musculus | 0 | 241 |
ENSMUST00000126526 | Vps39-007 | processed_transcript | Mus_musculus | 0 | 191 |