C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, beta 6 class V
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000122495 tubb6-001 ENSDARG00000055649 7955 + 24:3130620-3137026 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000122495
Transcript ID Brain Heart Liver Muscle
ENSDART00000122495 0.739±0.00 38.210±3.59 0.254±0.00 0.523±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025T CIL_00025T_0001 CGP 24:3118935-3137133

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005525 IEA GTP binding
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0007017 IEA microtubule-based process
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001513 Tubb6-201 protein_coding Mus_musculus 0 1168
ENSMUST00000071135 Tubb4a-201 protein_coding Mus_musculus 0 874
ENSMUST00000121633 Gm8908-001 processed_pseudogene Mus_musculus 0 457

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