C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: transient receptor potential cation channel, subfamily M, member 1b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000123249 trpm1b-202 ENSDARG00000061399 7955 + 25:35397065-35430445 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000123249
Transcript ID Brain Heart Liver Muscle
ENSDART00000123249 0.073±0.05 0.033±0.00 0.179±0.00 0.043±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256552 TRPM1-004 protein_coding Homo_sapiens 0 955
ENST00000397795 TRPM1-001 protein_coding Homo_sapiens 0 955
ENST00000542188 TRPM1-201 protein_coding Homo_sapiens 0 955
ENST00000557948 TRPM1-010 retained_intron Homo_sapiens 0 399
ENST00000558212 TRPM1-011 retained_intron Homo_sapiens 0 429
ENST00000558445 TRPM1-008 protein_coding Homo_sapiens 0 955
ENST00000558768 TRPM1-007 protein_coding Homo_sapiens 0 955
ENST00000611448 TRPM1-202 protein_coding Homo_sapiens 0 950
ENST00000615583 TRPM1-203 protein_coding Homo_sapiens 0 950
ENST00000617515 TRPM1-204 protein_coding Homo_sapiens 0 950
ENST00000618210 TRPM1-205 protein_coding Homo_sapiens 0 950

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