| Transcript ID | Brain | Ovary |
|---|---|---|
| ENST00000397795 | 0.008±0.00 | 0.004±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | transient receptor potential cation channel, subfamily M, member 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000397795  |
TRPM1-001 |
ENSG00000134160 |
9606 | - |
15:31001061-31101707  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005216 | IEA | ion channel activity |
| GO:0005262 | IDA | calcium channel activity |
| GO:0005886 | TAS | plasma membrane |
| GO:0005887 | TAS | integral component of plasma membrane |
| GO:0006810 | TAS | transport |
| GO:0006811 | IEA | ion transport |
| GO:0007216 | IEA:IMP | G-protein coupled glutamate receptor signaling pathway |
| GO:0007601 | IMP | visual perception |
| GO:0016020 | IEA | membrane |
| GO:0016021 | IEA | integral component of membrane |
| GO:0034220 | TAS | ion transmembrane transport |
| GO:0055085 | TAS:IEA | transmembrane transport |
| GO:0060402 | IDA | calcium ion transport into cytosol |
| GO:0070588 | TAS | calcium ion transmembrane transport |
| GO:0071482 | IMP | cellular response to light stimulus |
| GO:0098655 | IEA | cation transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000107519
|
Trpm1-005 | protein_coding | Mus_musculus | 0 | 4610 |
|
ENSMUST00000085222
|
Trpm1-003 | protein_coding | Mus_musculus | 0 | 4599 |
|
ENSMUST00000107525
|
Trpm1-001 | protein_coding | Mus_musculus | 0 | 4516 |
|
ENSMUST00000177102
|
Trpm1-201 | protein_coding | Mus_musculus | 0 | 2030 |
|
ENSMUST00000107516
|
Trpm1-007 | retained_intron | Mus_musculus | 0 | 2030 |
|
ENSMUST00000032737
|
Trpm1-008 | protein_coding | Mus_musculus | 0 | 1635 |
|
ENSMUST00000141574
|
Trpm1-006 | retained_intron | Mus_musculus | 0 | 1428 |
|
ENSMUST00000153421
|
Trpm1-002 | nonsense_mediated_decay | Mus_musculus | 0 | 1421 |
|
ENSMUST00000107515
|
Trpm1-009 | protein_coding | Mus_musculus | 0 | 1362 |
|
ENSDART00000123249
|
trpm1b-202 | protein_coding | Danio_rerio | 0 | 955 |
|
ENSMUST00000107527
|
Trpm1-004 | protein_coding | Mus_musculus | 0 | 880 |
|
ENSMUST00000124597
|
Trpm1-017 | retained_intron | Mus_musculus | 0 | 800 |
|
ENSMUST00000138074
|
Trpm1-012 | retained_intron | Mus_musculus | 0 | 754 |
|
ENSMUST00000155787
|
Trpm1-016 | processed_transcript | Mus_musculus | 0 | 675 |
|
ENSMUST00000140277
|
Trpm1-011 | retained_intron | Mus_musculus | 0 | 556 |
|
ENSMUST00000138609
|
Trpm1-015 | processed_transcript | Mus_musculus | 0 | 353 |
|
ENSMUST00000176392
|
Trpm1-018 | processed_transcript | Mus_musculus | 0 | 331 |
|
ENSMUST00000176623
|
Trpm1-021 | protein_coding | Mus_musculus | 0 | 311 |
