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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | transient receptor potential cation channel, subfamily M, member 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000558768  |
TRPM1-007 |
ENSG00000134160 |
9606 | - |
15:31001822-31068092  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005216 | IEA | ion channel activity |
| GO:0006811 | IEA | ion transport |
| GO:0016020 | IEA | membrane |
| GO:0055085 | IEA | transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000107519
|
Trpm1-005 | protein_coding | Mus_musculus | 0 | 4252 |
|
ENSMUST00000085222
|
Trpm1-003 | protein_coding | Mus_musculus | 0 | 4252 |
|
ENSMUST00000107525
|
Trpm1-001 | protein_coding | Mus_musculus | 0 | 4169 |
|
ENSMUST00000177102
|
Trpm1-201 | protein_coding | Mus_musculus | 0 | 1672 |
|
ENSMUST00000107516
|
Trpm1-007 | retained_intron | Mus_musculus | 0 | 1672 |
|
ENSMUST00000107515
|
Trpm1-009 | protein_coding | Mus_musculus | 0 | 1277 |
|
ENSMUST00000032737
|
Trpm1-008 | protein_coding | Mus_musculus | 0 | 1277 |
|
ENSMUST00000153421
|
Trpm1-002 | nonsense_mediated_decay | Mus_musculus | 0 | 1074 |
|
ENSMUST00000141574
|
Trpm1-006 | retained_intron | Mus_musculus | 0 | 1070 |
|
ENSDART00000123249
|
trpm1b-202 | protein_coding | Danio_rerio | 0 | 955 |
|
ENSMUST00000107527
|
Trpm1-004 | protein_coding | Mus_musculus | 0 | 880 |
|
ENSMUST00000124597
|
Trpm1-017 | retained_intron | Mus_musculus | 0 | 800 |
|
ENSMUST00000138074
|
Trpm1-012 | retained_intron | Mus_musculus | 0 | 754 |
|
ENSMUST00000155787
|
Trpm1-016 | processed_transcript | Mus_musculus | 0 | 675 |
|
ENSMUST00000140277
|
Trpm1-011 | retained_intron | Mus_musculus | 0 | 556 |
|
ENSMUST00000138609
|
Trpm1-015 | processed_transcript | Mus_musculus | 0 | 353 |
|
ENSMUST00000176392
|
Trpm1-018 | processed_transcript | Mus_musculus | 0 | 331 |
|
ENSMUST00000176623
|
Trpm1-021 | protein_coding | Mus_musculus | 0 | 311 |
