C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: latrophilin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000124480 LPHN1 (2 of 2)-201 ENSDARG00000089292 7955 - 3:48686653-48834155 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000124480
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000124480 1.182±0.80 0.031±0.00 0.140±0.00 0.100±0.00 0.071±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004888 IEA transmembrane signaling receptor activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0005515 IEA protein binding
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007218 IEA neuropeptide signaling pathway
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045393 Lphn1-003 protein_coding Mus_musculus 0 593
ENSMUST00000124355 Lphn1-002 nonsense_mediated_decay Mus_musculus 0 593
ENSMUST00000131717 Lphn1-006 protein_coding Mus_musculus 0 593
ENSMUST00000132500 Lphn1-004 protein_coding Mus_musculus 0 593
ENSMUST00000141158 Lphn1-001 protein_coding Mus_musculus 0 593
ENSMUST00000150674 Lphn1-008 retained_intron Mus_musculus 0 318
ENSMUST00000152978 Lphn1-005 protein_coding Mus_musculus 0 593
ENST00000340736 LPHN1-001 protein_coding Homo_sapiens 0 656
ENST00000361434 LPHN1-002 protein_coding Homo_sapiens 0 652
ENST00000590223 LPHN1-003 retained_intron Homo_sapiens 0 226

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