C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vesicle amine transport protein 1 homolog (T. californica)-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000126956 vat1l-201 ENSDARG00000002502 7955 + Zv9_scaffold3485:101776-166677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000126956
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000126956 2.714±0.17 0.134±0.00 0.260±0.00 0.039±0.00 0.057±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YB CIL_0004YB_0001 CGP Zv9_scaffold3485:101776-187004

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008270 IEA zinc ion binding
GO:0016491 IEA oxidoreductase activity
GO:0016747 IEA transferase activity, transferring acyl groups other than amino-acyl groups
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049509 Vat1l-001 protein_coding Mus_musculus 0 584
ENSMUST00000124143 Vat1l-004 retained_intron Mus_musculus 7e-35 154
ENST00000302536 VAT1L-001 protein_coding Homo_sapiens 0 662

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