C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cholinergic receptor, nicotinic, alpha 4 (neuronal)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000127176 CHRNA4 (3 of 3)-201 ENSDARG00000087071 7955 + 6:58411061-58424415 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyENSDART00000127176
Transcript ID Brain Kidney
ENSDART00000127176 0.047±0.00 0.019±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370263 CHRNA4-001 protein_coding Homo_sapiens 0 414
ENST00000463705 CHRNA4-002 processed_transcript Homo_sapiens 0 318
ENST00000467563 CHRNA4-004 processed_transcript Homo_sapiens 0 353
ENST00000498043 CHRNA4-007 nonsense_mediated_decay Homo_sapiens 0 318
ENST00000615287 CHRNA4-201 protein_coding Homo_sapiens 0 318

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