C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zic family member 1 (odd-paired homolog, Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000127597 zic1-001 ENSDARG00000015567 7955 - 24:5050300-5053485 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverMuscleENSDART00000127597
Transcript ID Brain Kidney Liver Muscle
ENSDART00000127597 122.040±60.88 0.121±0.00 0.145±0.00 9.179±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JF CIL_0007JF_0003 UCNEbase 24:4915088-5164087
CIL_000589 CIL_000589_0001 CGP 24:5050300-5062137

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0007420 IEP brain development
GO:0008270 ISS zinc ion binding
GO:0021534 IGI cell proliferation in hindbrain
GO:0021592 IMP fourth ventricle development
GO:0030902 IMP hindbrain development
GO:0046872 IEA metal ion binding
GO:0048853 IMP forebrain morphogenesis
GO:0060059 IMP embryonic retina morphogenesis in camera-type eye

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034927 Zic1-001 protein_coding Mus_musculus 6e-22 111
ENST00000282928 ZIC1-001 protein_coding Homo_sapiens 3e-25 122

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