C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histocompatibility (minor) 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000128433 hm13-001 ENSDARG00000037846 7955 - 23:496639-509600 protein_coding

Danio rerio EnsemblZv9

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000128433
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000128433 33.907±4.28 16.992±0.44 7.923±0.00 15.345±0.00 12.090±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004190 IEA aspartic-type endopeptidase activity
GO:0016021 IEA integral to membrane
GO:0043523 IMP regulation of neuron apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335574 HM13-009 protein_coding Homo_sapiens 0 649
ENST00000340852 HM13-011 protein_coding Homo_sapiens 0 649
ENST00000344042 HM13-014 protein_coding Homo_sapiens 0 289
ENST00000398174 HM13-012 protein_coding Homo_sapiens 0 649
ENST00000460225 HM13-018 processed_transcript Homo_sapiens 7e-36 154
ENST00000466766 HM13-015 processed_transcript Homo_sapiens 2e-35 152
ENST00000496438 HM13-017 processed_transcript Homo_sapiens 0 209
ENST00000498035 HM13-013 protein_coding Homo_sapiens 0 209

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