C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000129547 CABZ01087568.1-201 ENSDARG00000089170 7955 + 15:46526307-46537101 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000129547
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000129547 53.863±0.00 45.943±0.00 2.549±0.00 4.919±0.00 21.004±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120247 Sik3-004 protein_coding Mus_musculus 0.000005 58
ENSMUST00000120463 Sik3-005 protein_coding Mus_musculus 0.000002 60
ENSMUST00000126865 Sik3-001 protein_coding Mus_musculus 0.000009 58
ENSMUST00000153152 Sik3-003 processed_transcript Mus_musculus 0.000002 60
ENST00000375300 SIK3-001 protein_coding Homo_sapiens 2e-21 110
ENST00000415541 SIK3-013 nonsense_mediated_decay Homo_sapiens 1e-21 110
ENST00000445177 SIK3-002 protein_coding Homo_sapiens 0.000000001 71
ENST00000446921 SIK3-014 protein_coding Homo_sapiens 0.0000000007 71
ENST00000465421 SIK3-005 retained_intron Homo_sapiens 0.0000000006 71
ENST00000488337 SIK3-004 processed_transcript Homo_sapiens 0.0000000008 71

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