C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calponin 1, basic, smooth muscle, b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000133772 cnn1b-001 ENSDARG00000093937 7955 - 3:13617465-13640483 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000133772
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000133772 0.954±0.02 25.575±0.00 1.664±0.00 0.256±0.00 2.176±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0005515 IEA protein binding
GO:0031032 IEA actomyosin structure organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252456 CNN1-001 protein_coding Homo_sapiens 0 370
ENST00000535659 CNN1-003 protein_coding Homo_sapiens 0 351
ENST00000586577 CNN1-008 protein_coding Homo_sapiens 4.2039e-45 185
ENST00000588935 CNN1-007 protein_coding Homo_sapiens 0 241
ENST00000592923 CNN1-002 protein_coding Homo_sapiens 0 351

Loading