C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calponin 1, basic, smooth muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000586577 CNN1-008 ENSG00000130176 9606 + 19:11546708-11549724 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENST00000586577
Transcript ID Placenta Testis
ENST00000586577 7.317±0.00 14.258±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000767 CIL_000767_0001 CGP 19:11505916-11550323
CIL_00076D CIL_00076D_0001 CGP 19:11538717-11559236

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001384 Cnn1-201 protein_coding Mus_musculus 0 547
ENSDART00000141018 cnn1b-201 protein_coding Danio_rerio 4.2039e-45 185
ENSDART00000133772 cnn1b-001 protein_coding Danio_rerio 4.2039e-45 185

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