C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: a disintegrin and metallopeptidase domain 17b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000135391 adam17b-201 ENSDARG00000093093 7955 + 20:29615970-29639428 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverMuscleENSDART00000135391
Transcript ID Heart Liver Muscle
ENSDART00000135391 1.105±0.00 0.353±0.00 0.217±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064536 Adam17-001 protein_coding Mus_musculus 4e-38 165
ENSMUST00000101551 Adam17-002 protein_coding Mus_musculus 4e-38 165
ENSMUST00000127974 Adam17-003 nonsense_mediated_decay Mus_musculus 4e-38 165
ENSMUST00000141799 Adam17-005 processed_transcript Mus_musculus 8e-40 167
ENSMUST00000145118 Adam17-007 nonsense_mediated_decay Mus_musculus 1e-38 167
ENSMUST00000155115 Adam17-004 retained_intron Mus_musculus 2e-30 139

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