C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB11 family interacting protein 3 (class II)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000136836 rab11fip3-001 ENSDARG00000016490 7955 + 24:39226376-39296371 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00031N CIL_00031N_0001 CGP 24:39212205-39301267

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000910 ISS cytokinesis
GO:0005509 IEA calcium ion binding
GO:0005737 IEA cytoplasm
GO:0005768 IEA endosome
GO:0005813 ISS centrosome
GO:0005856 IEA cytoskeleton
GO:0006810 IEA transport
GO:0007049 IEA cell cycle
GO:0016020 IEA membrane
GO:0017137 ISS Rab GTPase binding
GO:0030306 ISS ADP-ribosylation factor binding
GO:0030496 ISS midbody
GO:0032154 ISS cleavage furrow
GO:0032456 ISS endocytic recycling
GO:0042803 ISS protein homodimerization activity
GO:0046872 IEA metal ion binding
GO:0051301 IEA cell division
GO:0055037 ISS recycling endosome
GO:0055038 IEA recycling endosome membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262305 RAB11FIP3-001 protein_coding Homo_sapiens 0 375
ENST00000434585 RAB11FIP3-010 protein_coding Homo_sapiens 0 375
ENST00000450428 RAB11FIP3-201 protein_coding Homo_sapiens 0 375
ENST00000461009 RAB11FIP3-007 retained_intron Homo_sapiens 0.0000000000005 79
ENST00000464263 RAB11FIP3-006 retained_intron Homo_sapiens 0.00000000000003 82
ENST00000487899 RAB11FIP3-005 retained_intron Homo_sapiens 0.0000000000007 79
ENST00000610934 RAB11FIP3-202 protein_coding Homo_sapiens 0 375
ENST00000611004 RAB11FIP3-203 protein_coding Homo_sapiens 0 375

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