C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00031N_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000045257-ENSDARG00000016490 | CGP | 7955 | 24:39212205-39301267  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000016490  (rab11fip3)RAB11 family interacting protein 3 (class II) |
ENSDART00000010764 (rab11fip3-201)
|
39226376-39301267 | protein_coding | |
|
ENSDART00000136836 (rab11fip3-001)
|
39226376-39296371 | protein_coding | ||
|
ENSDARG00000045257 (decr2) 2,4-dienoyl CoA reductase 2, peroxisomal |
ENSDART00000066558 (decr2-001)
|
39212205-39224753 | protein_coding | |
|
ENSDART00000133875 (decr2-003)
|
39221831-39224724 | processed_transcript | ||
|
ENSDART00000145877 (decr2-002)
|
39212285-39215130 | retained_intron | ||
| CIL_00031N_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000242612-ENSG00000090565 | CGP | 9606 | 16:401826-523011 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000090565 (RAB11FIP3) RAB11 family interacting protein 3 (class II) |
ENST00000262305 (RAB11FIP3-001)
|
425619-523011 | protein_coding | |
|
ENST00000412256 (RAB11FIP3-004)
|
482657-497448 | protein_coding | ||
|
ENST00000434585 (RAB11FIP3-010)
|
426379-522355 | protein_coding | ||
|
ENST00000449879 (RAB11FIP3-009)
|
474924-503063 | protein_coding | ||
|
ENST00000450428 (RAB11FIP3-201)
|
474850-522478 | protein_coding | ||
|
ENST00000452814 (RAB11FIP3-002)
|
474869-505605 | protein_coding | ||
|
ENST00000461009 (RAB11FIP3-007)
|
510453-519108 | retained_intron | ||
|
ENST00000464263 (RAB11FIP3-006)
|
510563-519762 | retained_intron | ||
|
ENST00000483002 (RAB11FIP3-008)
|
474924-489101 | retained_intron | ||
|
ENST00000487899 (RAB11FIP3-005)
|
502750-519018 | retained_intron | ||
|
ENST00000495663 (RAB11FIP3-003)
|
488942-497158 | retained_intron | ||
|
ENSG00000103202 (NME4) NME/NM23 nucleoside diphosphate kinase 4 |
ENST00000219479 (NME4-001)
|
397209-400759 | protein_coding | |
|
ENST00000382940 (NME4-011)
|
397209-400506 | protein_coding | ||
|
ENST00000397722 (NME4-002)
|
396725-400746 | protein_coding | ||
|
ENST00000433358 (NME4-009)
|
397237-400648 | protein_coding | ||
|
ENST00000444498 (NME4-012)
|
397200-410367 | nonsense_mediated_decay | ||
|
ENST00000448828 (NME4-006)
|
397199-400734 | nonsense_mediated_decay | ||
|
ENST00000450036 (NME4-010)
|
397742-400416 | protein_coding | ||
|
ENST00000454619 (NME4-005)
|
396769-399474 | protein_coding | ||
|
ENST00000460297 (NME4-003)
|
397208-400633 | retained_intron | ||
|
ENST00000468031 (NME4-004)
|
398410-400749 | retained_intron | ||
|
ENST00000620944 (NME4-201)
|
397192-400753 | protein_coding | ||
|
ENST00000621774 (NME4-202)
|
397192-400753 | protein_coding | ||
|
ENSG00000201034 (Y_RNA) Y RNA |
ENST00000364164 (Y_RNA.1-412)
|
439297-439397 | misc_RNA | |
|
ENSG00000230428 (RP1-196A12.1) |
ENST00000430231 (RP1-196A12.1-001)
|
451404-453461 | transcribed_unprocessed_pseudogene | |
|
ENSG00000242612 (DECR2) 2,4-dienoyl CoA reductase 2, peroxisomal |
ENST00000219481 (DECR2-001)
|
401826-412487 | protein_coding | |
|
ENST00000424398 (DECR2-008)
|
401882-411976 | protein_coding | ||
|
ENST00000429116 (DECR2-014)
|
407427-411928 | nonsense_mediated_decay | ||
|
ENST00000437024 (DECR2-006)
|
401915-412487 | nonsense_mediated_decay | ||
|
ENST00000439661 (DECR2-003)
|
401893-412370 | nonsense_mediated_decay | ||
|
ENST00000445291 (DECR2-009)
|
401926-411471 | nonsense_mediated_decay | ||
|
ENST00000461749 (DECR2-007)
|
409599-412481 | retained_intron | ||
|
ENST00000461802 (DECR2-010)
|
402005-407171 | processed_transcript | ||
|
ENST00000461947 (DECR2-015)
|
406895-412487 | processed_transcript | ||
|
ENST00000465166 (DECR2-012)
|
406946-410295 | retained_intron | ||
|
ENST00000469922 (DECR2-013)
|
410112-411050 | retained_intron | ||
|
ENSG00000276984 (LA16c-359F1.1) |
ENST00000621088 (LA16c-359F1.1-001)
|
424243-424543 | lincRNA | |
Expression Patterns
|
