C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin binding protein 5a (tomosyn)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000142806 stxbp5a-001 ENSDARG00000002656 7955 - 20:31771857-31944849 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000142806
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000142806 16.768±4.25 0.801±0.38 0.041±0.00 0.025±0.00 0.465±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004J4 CIL_0004J4_0001 CGP 20:31771857-32046090

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0016021 IEA integral to membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038213 Stxbp5-001 protein_coding Mus_musculus 0 346
ENSMUST00000125200 Stxbp5-003 protein_coding Mus_musculus 0 322
ENSMUST00000136259 Stxbp5-005 retained_intron Mus_musculus 0 346
ENSMUST00000141722 Stxbp5-002 protein_coding Mus_musculus 0 344
ENSMUST00000151435 Stxbp5-004 processed_transcript Mus_musculus 0 335

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