C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin binding protein 5 (tomosyn)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136259 Stxbp5-005 ENSMUSG00000019790 10090 - 10:9760581-9780328 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000136259
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000136259 1.328±0.25 4.232±1.41 1.205±0.00 1.148±0.00 1.316±0.65 2.585±0.13 0.461±0.00 1.139±0.31 0.717±0.08 2.344±0.02 3.033±0.84 1.015±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZZ CIL_0004ZZ_0002 CGP 10:9627259-9901079
CIL_0004J4 CIL_0004J4_0002 CGP 10:9755547-10472326

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000098731 stxbp5b-201 protein_coding Danio_rerio 0 427
ENSDART00000101762 stxbp5a-201 protein_coding Danio_rerio 0 346
ENSDART00000142806 stxbp5a-001 protein_coding Danio_rerio 0 346
ENST00000321680 STXBP5-002 protein_coding Homo_sapiens 0 1299
ENST00000367475 STXBP5-005 protein_coding Homo_sapiens 0 276
ENST00000367480 STXBP5-003 protein_coding Homo_sapiens 0 1219
ENST00000367481 STXBP5-001 protein_coding Homo_sapiens 0 1413
ENST00000392291 STXBP5-004 protein_coding Homo_sapiens 0 630

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