C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin binding protein 5 (tomosyn)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038213 Stxbp5-001 ENSMUSG00000019790 10090 - 10:9755547-9900683 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000038213
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000038213 0.909±0.42 2.595±0.03 1.354±0.43 1.883±1.56 0.742±0.12 0.988±0.00 0.374±0.10 0.596±0.11 0.607±0.19 1.083±0.20 0.904±0.21 1.538±0.35 1.301±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZZ CIL_0004ZZ_0002 CGP 10:9627259-9901079
CIL_0004J4 CIL_0004J4_0002 CGP 10:9755547-10472326

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005892 IDA acetylcholine-gated channel complex
GO:0006887 IDA exocytosis
GO:0007409 TAS axonogenesis
GO:0015031 IEA protein transport
GO:0017075 IPI syntaxin-1 binding
GO:0017157 IDA regulation of exocytosis
GO:0019905 IPI syntaxin binding
GO:0030141 NAS secretory granule
GO:0045921 IDA positive regulation of exocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000098731 stxbp5b-201 protein_coding Danio_rerio 0 427
ENSDART00000101762 stxbp5a-201 protein_coding Danio_rerio 0 346
ENSDART00000142806 stxbp5a-001 protein_coding Danio_rerio 0 346
ENST00000321680 STXBP5-002 protein_coding Homo_sapiens 0 4301
ENST00000367475 STXBP5-005 protein_coding Homo_sapiens 0 276
ENST00000367480 STXBP5-003 protein_coding Homo_sapiens 0 2832
ENST00000367481 STXBP5-001 protein_coding Homo_sapiens 0 2832
ENST00000392291 STXBP5-004 protein_coding Homo_sapiens 0 630
ENST00000546097 STXBP5-201 protein_coding Homo_sapiens 0 1301

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