C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SAFB-like, transcription modulator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000142818 sltm-001 ENSDARG00000052728 7955 - 7:31875020-31896958 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000142818
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000142818 14.615±0.08 9.401±0.08 13.373±0.00 1.896±0.00 4.178±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049263 Sltm-201 protein_coding Mus_musculus 0 228
ENST00000249736 SLTM-014 protein_coding Homo_sapiens 0 274
ENST00000380516 SLTM-001 protein_coding Homo_sapiens 0 274
ENST00000473359 SLTM-010 retained_intron Homo_sapiens 2e-32 143
ENST00000492526 SLTM-002 nonsense_mediated_decay Homo_sapiens 1e-31 143
ENST00000497088 SLTM-005 retained_intron Homo_sapiens 3e-32 143
ENST00000557924 SLTM-011 nonsense_mediated_decay Homo_sapiens 1e-31 143
ENST00000558756 SLTM-019 nonsense_mediated_decay Homo_sapiens 3e-32 143
ENST00000559305 SLTM-016 nonsense_mediated_decay Homo_sapiens 9e-31 137

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