C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: homeo box D12a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000142842 hoxd12a-001 ENSDARG00000059263 7955 - 9:1972681-1976813 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENSDART00000142842
Transcript ID Kidney
ENSDART00000142842 0.367±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0004 UCNEbase 9:1732069-2355236

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007275 IEA multicellular organismal development
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121043 Hoxa10-004 protein_coding Mus_musculus 0.0000006 60
ENSMUST00000125581 Hoxa10-001 protein_coding Mus_musculus 0.000001 60
ENSMUST00000126402 Hoxa10-002 processed_transcript Mus_musculus 0.0000007 60
ENSMUST00000142611 Hoxa10-003 processed_transcript Mus_musculus 0.0000004 60

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