C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | sphingomyelin phosphodiesterase 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSDART00000144131  |
smpd4-004 |
ENSDARG00000020730 |
7955 | + |
21:17733340-17737933  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004H9 | CIL_0004H9_0001 | CGP | 21:17722272-17744520 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000006053
|
Smpd4-001 | protein_coding | Mus_musculus | 0 | 233 |
|
ENSMUST00000090159
|
Smpd4-004 | protein_coding | Mus_musculus | 9.94922e-44 | 183 |
|
ENSMUST00000163476
|
Smpd4-002 | protein_coding | Mus_musculus | 0 | 215 |
|
ENSMUST00000163997
|
Smpd4-011 | protein_coding | Mus_musculus | 0 | 215 |
|
ENSMUST00000164292
|
Smpd4-022 | retained_intron | Mus_musculus | 0 | 211 |
|
ENSMUST00000165363
|
Smpd4-003 | protein_coding | Mus_musculus | 0 | 200 |
|
ENSMUST00000166091
|
Smpd4-005 | retained_intron | Mus_musculus | 0 | 215 |
|
ENSMUST00000167592
|
Smpd4-020 | retained_intron | Mus_musculus | 8e-28 | 128 |
|
ENSMUST00000170117
|
Smpd4-012 | nonsense_mediated_decay | Mus_musculus | 0 | 233 |
|
ENSMUST00000170273
|
Smpd4-014 | protein_coding | Mus_musculus | 0 | 215 |
|
ENSMUST00000170366
|
Smpd4-009 | protein_coding | Mus_musculus | 0 | 215 |
|
ENSMUST00000170401
|
Smpd4-006 | retained_intron | Mus_musculus | 0 | 215 |
|
ENSMUST00000170996
|
Smpd4-007 | protein_coding | Mus_musculus | 1e-34 | 152 |
