C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: abl-interactor 2b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000151037 abi2b-002 ENSDARG00000014875 7955 + 6:9881473-9920513 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000JP CIL_0000JP_0001 CGP 6:9863332-9921002

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052332 Abi2-001 protein_coding Mus_musculus 0 368
ENSMUST00000187709 Abi2-007 protein_coding Mus_musculus 0 368
ENSMUST00000188594 Abi2-004 protein_coding Mus_musculus 0 318
ENSMUST00000188618 Abi2-002 protein_coding Mus_musculus 0 449
ENSMUST00000189082 Abi2-012 protein_coding Mus_musculus 0.0000000000005 79
ENSMUST00000189980 Abi2-003 protein_coding Mus_musculus 0 449
ENSMUST00000191493 Abi2-011 retained_intron Mus_musculus 0 318
ENST00000261016 ABI2-201 protein_coding Homo_sapiens 0 206
ENST00000261017 ABI2-002 protein_coding Homo_sapiens 0 302
ENST00000261018 ABI2-202 protein_coding Homo_sapiens 0 388
ENST00000295851 ABI2-001 protein_coding Homo_sapiens 0 388
ENST00000376135 ABI2-015 processed_transcript Homo_sapiens 0 278
ENST00000413635 ABI2-011 nonsense_mediated_decay Homo_sapiens 0.0000000000001 81
ENST00000416001 ABI2-003 nonsense_mediated_decay Homo_sapiens 0 196
ENST00000417864 ABI2-006 protein_coding Homo_sapiens 0 388
ENST00000422511 ABI2-007 protein_coding Homo_sapiens 0 388
ENST00000424558 ABI2-005 protein_coding Homo_sapiens 0 300
ENST00000425253 ABI2-023 nonsense_mediated_decay Homo_sapiens 0.0000000000005 79
ENST00000430418 ABI2-004 protein_coding Homo_sapiens 0 278
ENST00000431886 ABI2-013 nonsense_mediated_decay Homo_sapiens 0 220
ENST00000441061 ABI2-008 nonsense_mediated_decay Homo_sapiens 0 220
ENST00000444584 ABI2-014 nonsense_mediated_decay Homo_sapiens 2.8026e-45 185
ENST00000447762 ABI2-024 nonsense_mediated_decay Homo_sapiens 0.0000000000008 79
ENST00000494215 ABI2-012 retained_intron Homo_sapiens 0 220

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