C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: abl-interactor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187709 Abi2-007 ENSMUSG00000026782 10090 + 1:60409803-60477158 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryTestisENSMUST00000187709
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000187709 1.499±0.33 1.399±0.13 0.643±0.08 0.627±0.20 1.472±0.16 0.135±0.00 1.064±0.19 2.888±0.76 4.784±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000JP CIL_0000JP_0003 CGP 1:60343323-60481158
CIL_0000JQ CIL_0000JQ_0003 CGP 1:60409619-60567104

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000151564 abi2b-003 protein_coding Danio_rerio 0 433
ENSDART00000065471 abi2b-001 protein_coding Danio_rerio 0 433
ENSDART00000151037 abi2b-002 protein_coding Danio_rerio 0 368
ENSDART00000151395 abi2b-004 protein_coding Danio_rerio 0 331
ENSDART00000151222 abi2b-005 protein_coding Danio_rerio 0 318
ENST00000261016 ABI2-201 protein_coding Homo_sapiens 0 1079
ENST00000261017 ABI2-002 protein_coding Homo_sapiens 0 2272
ENST00000261018 ABI2-202 protein_coding Homo_sapiens 0 1199
ENST00000295851 ABI2-001 protein_coding Homo_sapiens 0 1199
ENST00000376135 ABI2-015 processed_transcript Homo_sapiens 0 704
ENST00000411547 ABI2-016 processed_transcript Homo_sapiens 0 292
ENST00000413635 ABI2-011 nonsense_mediated_decay Homo_sapiens 0 257
ENST00000416001 ABI2-003 nonsense_mediated_decay Homo_sapiens 0 603
ENST00000416396 ABI2-021 processed_transcript Homo_sapiens 0 701
ENST00000417864 ABI2-006 protein_coding Homo_sapiens 0 1199
ENST00000422511 ABI2-007 protein_coding Homo_sapiens 0 1199
ENST00000422719 ABI2-017 processed_transcript Homo_sapiens 0 412
ENST00000424558 ABI2-005 protein_coding Homo_sapiens 0 1277
ENST00000425253 ABI2-023 nonsense_mediated_decay Homo_sapiens 9.80909e-45 183
ENST00000430418 ABI2-004 protein_coding Homo_sapiens 0 841
ENST00000430574 ABI2-019 processed_transcript Homo_sapiens 0 965
ENST00000431886 ABI2-013 nonsense_mediated_decay Homo_sapiens 0 440
ENST00000441061 ABI2-008 nonsense_mediated_decay Homo_sapiens 0 1079
ENST00000444584 ABI2-014 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000447762 ABI2-024 nonsense_mediated_decay Homo_sapiens 0 422
ENST00000451591 ABI2-018 protein_coding Homo_sapiens 0 894
ENST00000454023 ABI2-020 protein_coding Homo_sapiens 0 817
ENST00000457812 RAPH1-005 protein_coding Homo_sapiens 0 268
ENST00000464761 ABI2-022 processed_transcript Homo_sapiens 0 586
ENST00000494215 ABI2-012 retained_intron Homo_sapiens 0 438

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