C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: abl-interactor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416001 ABI2-003 ENSG00000138443 9606 + 2:203328391-203427569 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000416001
Transcript ID Testis
ENST00000416001 23.616±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000JP CIL_0000JP_0002 CGP 2:203238449-203447723
CIL_0000JQ CIL_0000JQ_0002 CGP 2:203328219-203535410

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008154 IEA actin polymerization or depolymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052332 Abi2-001 protein_coding Mus_musculus 0 850
ENSMUST00000185788 Abi2-006 protein_coding Mus_musculus 0 846
ENSMUST00000189980 Abi2-003 protein_coding Mus_musculus 0 846
ENSMUST00000188594 Abi2-004 protein_coding Mus_musculus 0 830
ENSMUST00000187400 Abi2-005 protein_coding Mus_musculus 0 745
ENSMUST00000188618 Abi2-002 protein_coding Mus_musculus 0 632
ENSMUST00000187709 Abi2-007 protein_coding Mus_musculus 0 603
ENSMUST00000190158 Abi2-008 protein_coding Mus_musculus 0 592
ENSMUST00000186097 Abi2-009 protein_coding Mus_musculus 0 582
ENSMUST00000191493 Abi2-011 retained_intron Mus_musculus 0 411
ENSMUST00000189649 Abi2-010 retained_intron Mus_musculus 0 372
ENSDART00000065471 abi2b-001 protein_coding Danio_rerio 0 211
ENSMUST00000189082 Abi2-012 protein_coding Mus_musculus 0 200
ENSDART00000151222 abi2b-005 protein_coding Danio_rerio 0 198
ENSDART00000151564 abi2b-003 protein_coding Danio_rerio 0 196
ENSDART00000151037 abi2b-002 protein_coding Danio_rerio 0 196
ENSDART00000151395 abi2b-004 protein_coding Danio_rerio 0 189
ENSDART00000081040 abi2a-001 protein_coding Danio_rerio 4e-37 159

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