C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000JP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000006040-ENSDARG00000014875 CGP 7955 6:9863332-9921002
GeneTranscriptPositionBiotype
ENSDARG00000006040 (cyp20a1)
cytochrome P450, family 20, subfamily A, polypeptide 1 		ENSDART00000019325 (cyp20a1-001) 9863332-9880112 protein_coding
ENSDARG00000014875 (abi2b)
abl-interactor 2b 		ENSDART00000065471 (abi2b-001) 9881387-9921002 protein_coding
ENSDART00000151037 (abi2b-002) 9881473-9920513 protein_coding
ENSDART00000151222 (abi2b-005) 9881472-9920520 protein_coding
ENSDART00000151395 (abi2b-004) 9881477-9911663 protein_coding
ENSDART00000151482 (abi2b-006) 9891954-9911636 protein_coding
ENSDART00000151564 (abi2b-003) 9881473-9920513 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000JP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119004-ENSG00000138443 CGP 9606 2:203238449-203447723
GeneTranscriptPositionBiotype
ENSG00000119004 (CYP20A1)
cytochrome P450, family 20, subfamily A, polypeptide 1 		ENST00000356079 (CYP20A1-001) 203238940-203297345 protein_coding
ENST00000428265 (CYP20A1-010) 203239021-203280115 nonsense_mediated_decay
ENST00000429815 (CYP20A1-003) 203238982-203297226 protein_coding
ENST00000431118 (CYP20A1-005) 203239027-203298286 nonsense_mediated_decay
ENST00000443941 (CYP20A1-011) 203239035-203285732 protein_coding
ENST00000449301 (CYP20A1-002) 203238977-203297242 nonsense_mediated_decay
ENST00000461371 (CYP20A1-004) 203238982-203297014 processed_transcript
ENST00000463131 (CYP20A1-008) 203239011-203285679 processed_transcript
ENST00000489360 (CYP20A1-009) 203239021-203285732 processed_transcript
ENST00000611416 (CYP20A1-201) 203238449-203305840 protein_coding
ENST00000613925 (CYP20A1-202) 203239009-203305611 protein_coding
ENSG00000138443 (ABI2)
abl-interactor 2 		ENST00000261016 (ABI2-201) 203328239-203432172 protein_coding
ENST00000261017 (ABI2-002) 203328280-203432173 protein_coding
ENST00000261018 (ABI2-202) 203328239-203432172 protein_coding
ENST00000295851 (ABI2-001) 203328219-203447723 protein_coding
ENST00000376135 (ABI2-015) 203328459-203383296 processed_transcript
ENST00000411547 (ABI2-016) 203380226-203402677 processed_transcript
ENST00000413635 (ABI2-011) 203328395-203376132 nonsense_mediated_decay
ENST00000416001 (ABI2-003) 203328391-203427569 nonsense_mediated_decay
ENST00000416396 (ABI2-021) 203394748-203427219 processed_transcript
ENST00000417864 (ABI2-006) 203328407-203427269 protein_coding
ENST00000422511 (ABI2-007) 203328484-203428596 protein_coding
ENST00000422719 (ABI2-017) 203380358-203416972 processed_transcript
ENST00000424558 (ABI2-005) 203328395-203427948 protein_coding
ENST00000425253 (ABI2-023) 203328394-203366957 nonsense_mediated_decay
ENST00000430418 (ABI2-004) 203328392-203427528 protein_coding
ENST00000430574 (ABI2-019) 203380275-203416983 processed_transcript
ENST00000431886 (ABI2-013) 203328399-203380277 nonsense_mediated_decay
ENST00000441061 (ABI2-008) 203328336-203427528 nonsense_mediated_decay
ENST00000444584 (ABI2-014) 203328405-203380273 nonsense_mediated_decay
ENST00000447762 (ABI2-024) 203328282-203380306 nonsense_mediated_decay
ENST00000451591 (ABI2-018) 203380308-203402734 protein_coding
ENST00000454023 (ABI2-020) 203391044-203427411 protein_coding
ENST00000464761 (ABI2-022) 203402706-203436883 processed_transcript
ENST00000494215 (ABI2-012) 203328458-203367419 retained_intron
ENSG00000238285 (MRPL50P2)
mitochondrial ribosomal protein L50 pseudogene 2 		ENST00000416821 (MRPL50P2-001) 203315390-203315871 processed_pseudogene
ENSG00000264041 (RN7SL670P)
RNA, 7SL, cytoplasmic 670, pseudogene 		ENST00000577235 (RN7SL670P-201) 203259604-203259897 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0000JP_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049439-ENSMUSG00000026782 CGP 10090 1:60343323-60481158
GeneTranscriptPositionBiotype
ENSMUSG00000026782 (Abi2)
abl-interactor 2 		ENSMUST00000052332 (Abi2-001) 60409619-60481158 protein_coding
ENSMUST00000185788 (Abi2-006) 60437083-60477758 protein_coding
ENSMUST00000186097 (Abi2-009) 60437212-60477083 protein_coding
ENSMUST00000187400 (Abi2-005) 60437207-60476920 protein_coding
ENSMUST00000187709 (Abi2-007) 60409803-60477158 protein_coding
ENSMUST00000188594 (Abi2-004) 60409695-60477088 protein_coding
ENSMUST00000188618 (Abi2-002) 60409695-60481158 protein_coding
ENSMUST00000189082 (Abi2-012) 60409795-60447304 protein_coding
ENSMUST00000189649 (Abi2-010) 60409808-60434492 retained_intron
ENSMUST00000189980 (Abi2-003) 60409734-60479518 protein_coding
ENSMUST00000190158 (Abi2-008) 60438942-60477304 protein_coding
ENSMUST00000191493 (Abi2-011) 60409781-60444778 retained_intron
ENSMUSG00000049439 (Cyp20a1)
cytochrome P450, family 20, subfamily a, polypeptide 1 		ENSMUST00000060608 (Cyp20a1-001) 60343323-60388060 protein_coding
ENSMUST00000114202 (Cyp20a1-002) 60343323-60372707 retained_intron
ENSMUST00000148443 (Cyp20a1-003) 60343323-60388060 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JP_0001ENSDARG00000006040ENSDART00000019325ENSDARG00000014875ENSDART00000065471ENSDART00000151037ENSDART00000151222ENSDART00000151395ENSDART00000151482ENSDART00000151564CIL_0000JP_0002ENSG00000119004ENST00000356079ENST00000428265ENST00000429815ENST00000431118ENST00000443941ENST00000449301ENST00000461371ENST00000463131ENST00000489360ENST00000611416ENST00000613925ENSG00000138443ENST00000261016ENST00000261017ENST00000261018ENST00000295851ENST00000376135ENST00000411547ENST00000413635ENST00000416001ENST00000416396ENST00000417864ENST00000422511ENST00000422719ENST00000424558ENST00000425253ENST00000430418ENST00000430574ENST00000431886ENST00000441061ENST00000444584ENST00000447762ENST00000451591ENST00000454023ENST00000464761ENST00000494215ENSG00000238285ENST00000416821ENSG00000264041ENST00000577235CIL_0000JP_0003ENSMUSG00000026782ENSMUST00000052332ENSMUST00000185788ENSMUST00000186097ENSMUST00000187400ENSMUST00000187709ENSMUST00000188594ENSMUST00000188618ENSMUST00000189082ENSMUST00000189649ENSMUST00000189980ENSMUST00000190158ENSMUST00000191493ENSMUSG00000049439ENSMUST00000060608ENSMUST00000114202ENSMUST00000148443
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000JP_0001ENSDARG00000006040ENSDART00000019325ENSDARG00000014875ENSDART00000065471CIL_0000JP_0002ENSG00000119004ENST00000356079ENST00000428265ENST00000431118ENST00000443941ENST00000449301ENST00000461371ENST00000611416ENST00000613925ENSG00000138443ENST00000261016ENST00000261017ENST00000261018ENST00000416001ENSG00000238285ENST00000416821ENSG00000264041ENST00000577235CIL_0000JP_0003ENSMUSG00000026782ENSMUST00000052332ENSMUST00000186097ENSMUST00000187400ENSMUST00000187709ENSMUST00000188594ENSMUST00000188618ENSMUST00000189980ENSMUSG00000049439ENSMUST00000060608ENSMUST00000114202ENSMUST00000148443
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000006040 ENSDART00000019325 N/A N/A N/A 6.773±4.25 N/A N/A 5.674±4.51 10.422±5.69 1.769±0.00 N/A 2.911±0.00 N/A N/A N/A
ENSDARG00000014875 ENSDART00000065471 N/A N/A N/A 6.768±0.00 N/A N/A N/A N/A 0.526±0.00 N/A N/A N/A N/A N/A
ENSDART00000151037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151564 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119004 ENST00000356079 N/A N/A N/A N/A N/A 1.397±0.00 N/A 1.602±0.00 2.818±0.00 3.116±0.00 N/A 4.482±0.00 N/A N/A
ENST00000428265 N/A N/A N/A N/A N/A N/A 2.320±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000429815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.332±0.00 2.382±0.00 1.723±0.00
ENST00000443941 N/A N/A 4.363±0.00 N/A N/A 3.991±0.00 N/A 5.630±0.00 N/A 10.217±0.00 2.649±0.00 N/A N/A N/A
ENST00000449301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.463±0.00 N/A N/A N/A
ENST00000461371 N/A N/A N/A N/A 3.801±0.00 N/A 1.702±0.23 3.926±0.36 3.498±1.05 2.288±0.00 N/A 5.395±1.03 2.701±0.22 3.476±0.12
ENST00000463131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611416 N/A 1.746±0.00 N/A N/A 0.515±0.00 0.409±0.00 N/A 1.729±0.00 N/A 0.309±0.00 0.280±0.00 1.287±0.77 0.428±0.00 1.527±0.76
ENST00000613925 N/A N/A 3.528±0.00 N/A N/A 2.386±0.00 N/A N/A N/A N/A N/A 3.892±0.00 N/A N/A
ENSG00000138443 ENST00000261016 N/A N/A 1.534±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000261017 4.804±0.00 4.399±0.00 2.543±0.00 6.425±1.38 4.414±0.30 5.052±2.59 3.297±1.46 8.190±0.00 6.170±0.00 6.081±0.68 1.107±0.26 7.421±3.65 4.086±0.21 8.980±1.79
ENST00000261018 N/A N/A N/A 15.040±2.57 N/A N/A 3.496±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000295851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000411547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.616±0.00
ENST00000416396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000425253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000444584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000238285 ENST00000416821 N/A 0.184±0.00 N/A N/A N/A 0.125±0.00 0.541±0.00 0.155±0.00 0.158±0.00 N/A N/A N/A N/A 0.204±0.11
ENSG00000264041 ENST00000577235 0.255±0.00 1.546±0.00 N/A 0.662±0.00 0.596±0.00 0.365±0.00 0.127±0.00 0.670±0.00 0.058±0.00 0.060±0.00 0.875±0.00 0.602±0.30 N/A 0.598±0.17
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026782 ENSMUST00000052332 3.597±1.74 1.179±0.45 5.632±0.78 12.274±1.62 1.578±0.32 0.734±0.33 1.479±0.21 2.550±0.40 1.040±0.70 2.608±1.30 0.416±0.17 2.834±1.26 3.187±1.82 2.570±0.80
ENSMUST00000185788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.093±0.00 2.737±0.00 2.579±0.00
ENSMUST00000187400 N/A N/A N/A 27.994±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.108±0.00
ENSMUST00000187709 1.499±0.33 1.399±0.13 N/A N/A 0.643±0.08 0.627±0.20 N/A 1.472±0.16 0.135±0.00 1.064±0.19 N/A 2.888±0.76 N/A 4.784±0.09
ENSMUST00000188594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.808±0.00
ENSMUST00000188618 N/A N/A N/A 9.037±4.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189980 N/A N/A N/A 4.835±0.00 N/A 0.481±0.00 N/A N/A N/A N/A N/A 1.208±0.25 1.239±0.45 0.347±0.00
ENSMUST00000190158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049439 ENSMUST00000060608 7.572±0.92 4.104±0.67 11.728±0.08 2.469±1.62 3.164±1.30 3.294±0.79 1.904±0.45 4.722±0.19 6.062±2.59 7.496±0.57 1.112±0.26 4.122±2.65 8.517±3.57 0.464±0.15
ENSMUST00000114202 1.990±0.00 2.057±0.18 N/A 1.094±0.00 2.023±0.67 1.516±0.42 1.504±0.34 N/A N/A N/A 1.600±0.00 2.338±0.73 1.879±0.00 N/A
ENSMUST00000148443 N/A N/A 3.817±0.43 1.572±0.65 0.574±0.00 0.568±0.00 N/A N/A N/A N/A 0.964±0.35 0.895±0.00 N/A 0.178±0.02

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