C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microtubule crosslinking factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145347 Mtcl1-003 ENSMUSG00000052105 10090 - 17:66336988-66385910 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000145347
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000145347 0.147±0.07 0.921±0.00 1.765±0.00 0.181±0.00 0.628±0.00 0.160±0.00 0.386±0.05 0.021±0.01 3.764±0.00 0.360±0.09 1.170±0.00 1.913±1.01 1.083±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 IEA extracellular space
GO:0010506 IEA regulation of autophagy

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000092402 soga3a-201 protein_coding Danio_rerio 0.0004 53
ENSDART00000156765 soga3a-001 nonsense_mediated_decay Danio_rerio 0.0004 53
ENSDART00000156685 soga3a-001 protein_coding Danio_rerio 0.0004 53
ENST00000306329 MTCL1-015 protein_coding Homo_sapiens 0 3578
ENST00000359865 MTCL1-001 protein_coding Homo_sapiens 0 2268
ENST00000400050 MTCL1-201 protein_coding Homo_sapiens 0 2268
ENST00000446207 MTCL1P1-001 processed_pseudogene Homo_sapiens 0 604
ENST00000517554 MTCL1-005 retained_intron Homo_sapiens 0 381
ENST00000517570 MTCL1-003 protein_coding Homo_sapiens 0 3578
ENST00000518226 MTCL1-012 processed_transcript Homo_sapiens 0 248
ENST00000518815 MTCL1-006 protein_coding Homo_sapiens 0 2010
ENST00000519823 MTCL1-017 processed_transcript Homo_sapiens 0 302
ENST00000520495 MTCL1-004 nonsense_mediated_decay Homo_sapiens 0 1164
ENST00000520926 MTCL1-013 retained_intron Homo_sapiens 0 477
ENST00000521018 MTCL1-010 processed_transcript Homo_sapiens 0 366
ENST00000522592 MTCL1-011 processed_transcript Homo_sapiens 0 278
ENST00000523811 MTCL1-009 processed_transcript Homo_sapiens 0 250
ENST00000581670 MTCL1-016 processed_transcript Homo_sapiens 0 623

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