C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: caveolin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000000058 Cav2-001 ENSMUSG00000000058 10090 + 6:17281185-17289115 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000058
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000058 161.512±89.55 48.364±5.69 23.015±12.71 1.585±0.64 104.133±30.60 19.168±1.43 21.767±3.17 27.552±6.09 1.399±0.45 211.252±50.35 7.217±0.56 48.626±20.82 2.413±2.06 2.189±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SP CIL_0007SP_0002 VISTA 6:16868699-17474875
CIL_00063N CIL_00063N_0003 CGP 6:17065149-17289115
CIL_00063M CIL_00063M_0003 CGP 6:17281185-17341452

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0001937 IMP negative regulation of endothelial cell proliferation
GO:0001938 IGI positive regulation of endothelial cell proliferation
GO:0002080 IDA acrosomal membrane
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005886 IDA plasma membrane
GO:0005887 IEA integral component of plasma membrane
GO:0005901 ISO:ISS caveola
GO:0006897 TAS endocytosis
GO:0006906 ISS vesicle fusion
GO:0007005 IMP mitochondrion organization
GO:0007029 IMP endoplasmic reticulum organization
GO:0007088 IEA regulation of mitosis
GO:0008285 IMP negative regulation of cell proliferation
GO:0016020 IDA membrane
GO:0016050 IEA vesicle organization
GO:0030133 IEA transport vesicle
GO:0030512 IGI negative regulation of transforming growth factor beta receptor signaling pathway
GO:0031234 ISS extrinsic component of cytoplasmic side of plasma membrane
GO:0031410 ISO cytoplasmic vesicle
GO:0031748 ISS D1 dopamine receptor binding
GO:0042803 IEA protein homodimerization activity
GO:0043234 ISO protein complex
GO:0045121 ISS membrane raft
GO:0048278 ISS vesicle docking
GO:0048471 ISS perinuclear region of cytoplasm
GO:0048741 IMP skeletal muscle fiber development
GO:0051259 IDA protein oligomerization
GO:0060161 ISS positive regulation of dopamine receptor signaling pathway
GO:0070836 ISS caveola assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222693 CAV2-001 protein_coding Homo_sapiens 0 597
ENST00000343213 CAV2-019 protein_coding Homo_sapiens 3.00018e-42 176
ENST00000393480 CAV2-023 protein_coding Homo_sapiens 0 392
ENST00000462876 CAV2-004 processed_transcript Homo_sapiens 0 322
ENST00000467035 CAV2-008 processed_transcript Homo_sapiens 4e-32 143
ENST00000472470 CAV2-015 processed_transcript Homo_sapiens 7e-34 148
ENST00000477018 CAV2-009 processed_transcript Homo_sapiens 5e-31 139
ENST00000484871 CAV2-010 processed_transcript Homo_sapiens 0 464
ENST00000485561 CAV2-013 processed_transcript Homo_sapiens 4e-34 148
ENST00000495841 CAV2-002 processed_transcript Homo_sapiens 0 425
ENST00000498493 CAV2-005 processed_transcript Homo_sapiens 0 448

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