C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00063M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052000-ENSDARG00000052004 CGP 7955 25:19043878-19180696
GeneTranscriptPositionBiotype
ENSDARG00000052000 (cav2)
caveolin 2 		ENSDART00000073726 (cav2-001) 19043878-19049085 protein_coding
ENSDARG00000052004 (cav1)
caveolin 1 		ENSDART00000061076 (cav1-201) 19050974-19180696 protein_coding
ENSDART00000148700 (cav1-002) 19051556-19062795 protein_coding
ENSDART00000149865 (cav1-001) 19050766-19064876 protein_coding
ENSDARG00000070903 (met)
met proto-oncogene (hepatocyte growth factor receptor) 		ENSDART00000104461 (met-201) 19074628-19166341 protein_coding
ENSDART00000148741 (met-001) 19071167-19166361 protein_coding
CIL_00063M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105971-ENSG00000105974 CGP 9606 7:116287380-116561184
GeneTranscriptPositionBiotype
ENSG00000105971 (CAV2)
caveolin 2 		ENST00000222693 (CAV2-001) 116499390-116508541 protein_coding
ENST00000343213 (CAV2-019) 116499740-116506554 protein_coding
ENST00000393480 (CAV2-023) 116499780-116501286 protein_coding
ENST00000460222 (CAV2-021) 116287864-116322823 processed_transcript
ENST00000462876 (CAV2-004) 116289878-116506108 processed_transcript
ENST00000465451 (CAV2-022) 116289913-116337241 processed_transcript
ENST00000467035 (CAV2-008) 116288073-116506105 processed_transcript
ENST00000472470 (CAV2-015) 116288073-116506108 processed_transcript
ENST00000477018 (CAV2-009) 116288073-116506100 processed_transcript
ENST00000478226 (CAV2-006) 116289878-116506029 processed_transcript
ENST00000484871 (CAV2-010) 116288073-116506108 processed_transcript
ENST00000485561 (CAV2-013) 116288073-116506108 processed_transcript
ENST00000490906 (CAV2-020) 116287380-116331776 processed_transcript
ENST00000495841 (CAV2-002) 116500044-116506353 processed_transcript
ENST00000498493 (CAV2-005) 116289877-116506093 processed_transcript
ENSG00000105974 (CAV1)
caveolin 1, caveolae protein, 22kDa 		ENST00000341049 (CAV1-001) 116524785-116561176 protein_coding
ENST00000393467 (CAV1-003) 116526293-116561176 protein_coding
ENST00000393468 (CAV1-004) 116526277-116559513 protein_coding
ENST00000393470 (CAV1-006) 116525001-116559319 protein_coding
ENST00000405348 (CAV1-008) 116525740-116561179 protein_coding
ENST00000451122 (CAV1-002) 116525009-116559636 nonsense_mediated_decay
ENST00000456473 (CAV1-007) 116525982-116559257 protein_coding
ENST00000489856 (CAV1-005) 116525012-116527018 retained_intron
ENST00000614113 (CAV1-201) 116525009-116561184 protein_coding
ENSG00000213167 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000392674 (Metazoa_SRP.1-207) 116320751-116321031 misc_RNA
ENSG00000216076 (AC002066.2)
 ENST00000401257 (AC002066.2-201) 116345855-116345944 miRNA
ENSG00000235427 (AC006159.5)
 ENST00000452009 (AC006159.5-001) 116542718-116551969 antisense
ENSG00000237813 (AC002066.1)
 ENST00000439070 (AC002066.1-001) 116416117-116465276 antisense
ENST00000446355 (AC002066.1-003) 116238260-116499465 antisense
ENSG00000243243 (AC073130.3)
 ENST00000444244 (AC073130.3-001) 116238004-116327896 antisense
ENST00000456289 (AC073130.3-002) 116237929-116239249 antisense
CIL_00063M_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000058-ENSMUSG00000007655 CGP 10090 6:17281185-17341452
GeneTranscriptPositionBiotype
ENSMUSG00000000058 (Cav2)
caveolin 2 		ENSMUST00000000058 (Cav2-001) 17281185-17289115 protein_coding
ENSMUST00000115459 (Cav2-002) 17281327-17282684 protein_coding
ENSMUST00000115462 (Cav2-003) 17281359-17287438 protein_coding
ENSMUSG00000007655 (Cav1)
caveolin 1, caveolae protein 		ENSMUST00000007799 (Cav1-001) 17306335-17341324 protein_coding
ENSMUST00000115453 (Cav1-002) 17307640-17341452 protein_coding
ENSMUST00000115454 (Cav1-007) 17307278-17339519 protein_coding
ENSMUST00000115455 (Cav1-009) 17306410-17339296 protein_coding
ENSMUST00000115456 (Cav1-008) 17306345-17340429 protein_coding
ENSMUST00000123439 (Cav1-006) 17307048-17339153 protein_coding
ENSMUST00000130505 (Cav1-003) 17306411-17327268 protein_coding
ENSMUST00000133065 (Cav1-004) 17307723-17327259 processed_transcript
ENSMUST00000150901 (Cav1-005) 17306423-17308203 protein_coding
ENSMUST00000177234 (Cav1-010) 17306411-17339351 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063M_0001ENSDARG00000052000ENSDART00000073726ENSDARG00000052004ENSDART00000061076ENSDART00000148700ENSDART00000149865ENSDARG00000070903ENSDART00000104461ENSDART00000148741CIL_00063M_0002ENSG00000105971ENST00000222693ENST00000343213ENST00000393480ENST00000460222ENST00000462876ENST00000465451ENST00000467035ENST00000472470ENST00000477018ENST00000478226ENST00000484871ENST00000485561ENST00000490906ENST00000495841ENST00000498493ENSG00000105974ENST00000341049ENST00000393467ENST00000393468ENST00000393470ENST00000405348ENST00000451122ENST00000456473ENST00000489856ENST00000614113ENSG00000213167ENST00000392674ENSG00000216076ENST00000401257ENSG00000235427ENST00000452009ENSG00000237813ENST00000439070ENST00000446355ENSG00000243243ENST00000444244ENST00000456289CIL_00063M_0003ENSMUSG00000000058ENSMUST00000000058ENSMUST00000115459ENSMUST00000115462ENSMUSG00000007655ENSMUST00000007799ENSMUST00000115453ENSMUST00000115454ENSMUST00000115455ENSMUST00000115456ENSMUST00000123439ENSMUST00000130505ENSMUST00000133065ENSMUST00000150901ENSMUST00000177234
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063M_0001ENSDARG00000052000ENSDART00000073726ENSDARG00000052004ENSDART00000061076ENSDART00000148700ENSDART00000149865ENSDARG00000070903ENSDART00000104461ENSDART00000148741CIL_00063M_0002ENSG00000105971ENST00000222693ENST00000343213ENST00000495841ENSG00000105974ENST00000341049ENST00000393467ENST00000393468ENST00000405348ENST00000456473ENST00000614113ENSG00000213167ENST00000392674ENSG00000216076ENST00000401257ENSG00000235427ENST00000452009ENSG00000237813ENST00000439070ENSG00000243243ENST00000444244CIL_00063M_0003ENSMUSG00000000058ENSMUST00000000058ENSMUST00000115462ENSMUSG00000007655ENSMUST00000007799ENSMUST00000115453ENSMUST00000115454ENSMUST00000115455ENSMUST00000115456ENSMUST00000133065
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052000 ENSDART00000073726 N/A N/A N/A 2.587±1.09 N/A N/A 24.074±6.54 4.461±0.31 3.998±0.00 N/A 5.039±0.00 N/A N/A N/A
ENSDARG00000052004 ENSDART00000061076 N/A N/A N/A 1.054±0.33 N/A N/A N/A 1.501±0.15 1.792±0.00 N/A N/A N/A N/A N/A
ENSDART00000148700 N/A N/A N/A N/A N/A N/A 185.822±14.20 27.485±5.74 N/A N/A N/A N/A N/A N/A
ENSDART00000149865 N/A N/A N/A 4.067±2.54 N/A N/A 46.041±25.05 10.235±3.65 N/A N/A 21.726±0.00 N/A N/A N/A
ENSDARG00000070903 ENSDART00000104461 N/A N/A N/A 0.035±0.01 N/A N/A 0.148±0.04 0.272±0.00 2.174±0.00 N/A N/A N/A N/A N/A
ENSDART00000148741 N/A N/A N/A 0.890±0.43 N/A N/A N/A 0.800±0.00 1.456±0.00 N/A 0.223±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105971 ENST00000222693 32.142±0.00 13.726±0.00 0.307±0.00 2.972±0.00 43.759±40.98 13.354±0.00 12.749±7.03 3.061±2.59 5.178±0.29 27.324±20.74 3.320±0.00 7.619±5.61 24.732±6.04 11.327±6.41
ENST00000343213 N/A N/A N/A N/A N/A 3.919±0.00 34.195±0.00 6.193±0.00 N/A N/A N/A N/A N/A N/A
ENST00000393480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495841 N/A N/A 0.873±0.00 1.477±0.00 7.561±0.00 N/A 25.327±11.03 3.410±0.00 18.841±0.00 N/A 3.528±0.00 9.615±0.00 30.994±0.00 N/A
ENST00000498493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000105974 ENST00000341049 19.334±0.00 7.597±0.00 1.433±0.00 0.613±0.35 34.515±19.28 18.604±5.71 18.635±0.78 1.646±0.26 39.401±0.00 25.727±0.16 3.380±0.89 7.333±3.74 38.642±2.35 7.215±3.55
ENST00000393467 37.902±0.00 11.193±0.00 0.702±0.00 0.329±0.00 88.328±84.97 14.911±9.17 21.116±0.00 2.697±0.00 11.010±9.58 35.943±3.03 6.250±0.00 13.778±11.06 53.082±10.53 9.182±5.65
ENST00000393468 N/A N/A N/A N/A 11.823±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000405348 43.967±0.00 18.793±0.00 N/A 1.088±0.00 119.565±0.00 68.019±0.00 44.717±0.00 7.002±0.00 1.585±0.00 83.002±0.00 11.430±0.00 21.213±17.50 97.372±5.10 40.051±0.00
ENST00000451122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456473 N/A N/A N/A N/A 16.467±0.00 N/A N/A 5.041±0.00 N/A 59.216±0.00 10.361±0.00 13.888±6.17 194.871±0.00 17.443±0.00
ENST00000489856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000614113 N/A N/A N/A N/A N/A N/A N/A N/A 0.402±0.00 N/A 1.614±0.00 N/A N/A N/A
ENSG00000213167 ENST00000392674 0.437±0.00 1.168±0.00 N/A 0.867±0.00 0.949±0.00 0.125±0.00 N/A 0.068±0.00 N/A N/A N/A N/A N/A 0.440±0.28
ENSG00000216076 ENST00000401257 0.443±0.00 0.425±0.00 N/A 0.621±0.00 N/A 0.375±0.00 0.226±0.00 0.397±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000235427 ENST00000452009 N/A 0.181±0.00 N/A N/A 0.326±0.00 N/A 0.181±0.00 N/A N/A N/A N/A 0.641±0.52 0.128±0.05 0.080±0.00
ENSG00000237813 ENST00000439070 0.173±0.00 0.031±0.00 N/A 0.031±0.00 1.112±1.00 N/A 0.176±0.00 N/A 0.067±0.00 0.376±0.00 N/A 0.054±0.03 0.129±0.01 0.288±0.19
ENST00000446355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243243 ENST00000444244 N/A N/A N/A N/A N/A 2.551±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000058 ENSMUST00000000058 161.512±89.55 48.364±5.69 23.015±12.71 1.585±0.64 104.133±30.60 19.168±1.43 21.767±3.17 27.552±6.09 1.399±0.45 211.252±50.35 7.217±0.56 48.626±20.82 2.413±2.06 2.189±0.90
ENSMUST00000115459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115462 N/A N/A N/A 1.015±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.969±0.00 N/A
ENSMUSG00000007655 ENSMUST00000007799 301.548±159.67 11.848±2.54 226.661±15.00 3.199±1.54 116.023±18.29 18.498±2.10 46.524±3.52 9.264±1.38 1.148±0.93 201.534±21.52 34.579±4.69 29.503±18.87 18.367±17.13 1.907±1.09
ENSMUST00000115453 43.913±0.00 9.512±2.05 N/A N/A N/A N/A N/A 3.562±0.39 0.375±0.28 N/A 6.457±0.97 14.413±2.92 N/A 0.825±0.23
ENSMUST00000115454 498.941±208.41 42.005±12.57 N/A N/A 405.943±295.43 38.221±0.00 56.121±6.78 17.473±2.07 0.551±0.16 N/A N/A N/A 4.564±0.00 4.474±0.53
ENSMUST00000115455 N/A N/A N/A 7.177±0.00 N/A N/A N/A N/A N/A N/A N/A 86.494±0.00 124.119±0.00 N/A
ENSMUST00000115456 407.230±226.00 33.614±6.20 N/A 0.997±0.00 168.385±14.55 65.513±8.39 65.241±16.50 16.745±3.85 0.423±0.20 388.107±76.14 N/A 140.228±58.86 2.153±0.00 3.019±1.93
ENSMUST00000123439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133065 N/A 54.733±13.69 N/A N/A N/A 76.957±14.58 N/A 38.079±0.35 1.169±0.39 537.558±0.00 N/A N/A N/A N/A
ENSMUST00000150901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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