C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: caveolin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000222693 CAV2-001 ENSG00000105971 9606 + 7:116499390-116508541 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000222693
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000222693 32.142±0.00 13.726±0.00 0.307±0.00 2.972±0.00 43.759±40.98 13.354±0.00 12.749±7.03 3.061±2.59 5.178±0.29 27.324±20.74 3.320±0.00 7.619±5.61 24.732±6.04 11.327±6.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SP CIL_0007SP_0001 VISTA 7:116053609-116657055
CIL_00063N CIL_00063N_0002 CGP 7:116210493-116508541
CIL_00063M CIL_00063M_0002 CGP 7:116287380-116561184

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0001937 ISS negative regulation of endothelial cell proliferation
GO:0001938 IEA positive regulation of endothelial cell proliferation
GO:0002080 IEA acrosomal membrane
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0005634 IEA nucleus
GO:0005794 ISS Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0005901 IEA:IDA caveola
GO:0006906 IDA vesicle fusion
GO:0007005 ISS mitochondrion organization
GO:0007029 ISS endoplasmic reticulum organization
GO:0007088 IEP regulation of mitosis
GO:0008285 IEA negative regulation of cell proliferation
GO:0016020 IDA membrane
GO:0016050 IDA vesicle organization
GO:0030133 IDA transport vesicle
GO:0030512 IEA negative regulation of transforming growth factor beta receptor signaling pathway
GO:0031234 IDA extrinsic component of cytoplasmic side of plasma membrane
GO:0031410 IDA cytoplasmic vesicle
GO:0031748 IPI D1 dopamine receptor binding
GO:0042803 IDA protein homodimerization activity
GO:0043234 IDA protein complex
GO:0045121 IDA membrane raft
GO:0048278 IDA vesicle docking
GO:0048471 IDA perinuclear region of cytoplasm
GO:0048741 ISS skeletal muscle fiber development
GO:0051259 IEA protein oligomerization
GO:0060161 IMP positive regulation of dopamine receptor signaling pathway
GO:0070836 IMP caveola assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000058 Cav2-001 protein_coding Mus_musculus 0 597
ENSMUST00000115459 Cav2-002 protein_coding Mus_musculus 0 392
ENSMUST00000115462 Cav2-003 protein_coding Mus_musculus 9.99967e-42 176

Loading