C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00063N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000051857-ENSDARG00000052000 CGP 7955 25:18962322-19049085
GeneTranscriptPositionBiotype
ENSDARG00000051857 (tes)
testis derived transcript (3 LIM domains)
ENSDART00000073563 (tes-201) 18962348-18983698 protein_coding
ENSDART00000073564 (tes-001) 18962322-18983700 protein_coding
ENSDART00000152103 (tes-002) 18970196-18976296 processed_transcript
ENSDARG00000052000 (cav2)
caveolin 2
ENSDART00000073726 (cav2-001) 19043878-19049085 protein_coding
CIL_00063N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135269-ENSG00000105971 CGP 9606 7:116210493-116508541
GeneTranscriptPositionBiotype
ENSG00000105971 (CAV2)
caveolin 2
ENST00000222693 (CAV2-001) 116499390-116508541 protein_coding
ENST00000343213 (CAV2-019) 116499740-116506554 protein_coding
ENST00000393480 (CAV2-023) 116499780-116501286 protein_coding
ENST00000460222 (CAV2-021) 116287864-116322823 processed_transcript
ENST00000462876 (CAV2-004) 116289878-116506108 processed_transcript
ENST00000465451 (CAV2-022) 116289913-116337241 processed_transcript
ENST00000467035 (CAV2-008) 116288073-116506105 processed_transcript
ENST00000472470 (CAV2-015) 116288073-116506108 processed_transcript
ENST00000477018 (CAV2-009) 116288073-116506100 processed_transcript
ENST00000478226 (CAV2-006) 116289878-116506029 processed_transcript
ENST00000484871 (CAV2-010) 116288073-116506108 processed_transcript
ENST00000485561 (CAV2-013) 116288073-116506108 processed_transcript
ENST00000490906 (CAV2-020) 116287380-116331776 processed_transcript
ENST00000495841 (CAV2-002) 116500044-116506353 processed_transcript
ENST00000498493 (CAV2-005) 116289877-116506093 processed_transcript
ENSG00000135269 (TES)
testis derived transcript (3 LIM domains)
ENST00000358204 (TES-001) 116210493-116258783 protein_coding
ENST00000393481 (TES-002) 116222804-116258783 protein_coding
ENST00000393484 (TES-005) 116250435-116252738 protein_coding
ENST00000455989 (TES-008) 116210539-116250288 protein_coding
ENST00000461440 (TES-010) 116210506-116249577 retained_intron
ENST00000463746 (TES-004) 116251751-116252580 retained_intron
ENST00000485009 (TES-006) 116222951-116250032 retained_intron
ENST00000492891 (TES-011) 116210549-116257668 nonsense_mediated_decay
ENST00000494384 (TES-009) 116250449-116252600 processed_transcript
ENST00000496871 (TES-007) 116210561-116249806 retained_intron
ENST00000496912 (TES-003) 116251507-116257576 retained_intron
ENSG00000213167 (Metazoa_SRP)
Metazoan signal recognition particle RNA
ENST00000392674 (Metazoa_SRP.1-207) 116320751-116321031 misc_RNA
ENSG00000216076 (AC002066.2)
ENST00000401257 (AC002066.2-201) 116345855-116345944 miRNA
ENSG00000237813 (AC002066.1)
ENST00000439070 (AC002066.1-001) 116416117-116465276 antisense
ENST00000446355 (AC002066.1-003) 116238260-116499465 antisense
ENSG00000237870 (AC073130.1)
ENST00000415502 (AC073130.1-003) 116283841-116286195 retained_intron
ENST00000420594 (AC073130.1-002) 116277132-116286734 lincRNA
ENST00000454897 (AC073130.1-004) 116277003-116286651 lincRNA
ENST00000457033 (AC073130.1-001) 116275606-116286664 lincRNA
ENSG00000243243 (AC073130.3)
ENST00000444244 (AC073130.3-001) 116238004-116327896 antisense
ENST00000456289 (AC073130.3-002) 116237929-116239249 antisense
ENSG00000279086 (RP11-667F14.1)
ENST00000624389 (RP11-667F14.1-001) 116209234-116211511 TEC
CIL_00063N_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029552-ENSMUSG00000000058 CGP 10090 6:17065149-17289115
GeneTranscriptPositionBiotype
ENSMUSG00000000058 (Cav2)
caveolin 2
ENSMUST00000000058 (Cav2-001) 17281185-17289115 protein_coding
ENSMUST00000115459 (Cav2-002) 17281327-17282684 protein_coding
ENSMUST00000115462 (Cav2-003) 17281359-17287438 protein_coding
ENSMUSG00000085171 (D830026I12Rik)
RIKEN cDNA D830026I12 gene
ENSMUST00000124434 (D830026I12Rik-002) 17198122-17210152 lincRNA
ENSMUST00000125170 (D830026I12Rik-003) 17197751-17204787 lincRNA
ENSMUST00000151170 (D830026I12Rik-001) 17198107-17205693 lincRNA
ENSMUSG00000085264 (Gm15581)
predicted gene 15581
ENSMUST00000131334 (Gm15581-001) 17206823-17385604 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063N_0001ENSDARG00000051857ENSDART00000073563ENSDART00000073564ENSDART00000152103ENSDARG00000052000ENSDART00000073726CIL_00063N_0002ENSG00000105971ENST00000222693ENST00000343213ENST00000393480ENST00000460222ENST00000462876ENST00000465451ENST00000467035ENST00000472470ENST00000477018ENST00000478226ENST00000484871ENST00000485561ENST00000490906ENST00000495841ENST00000498493ENSG00000135269ENST00000358204ENST00000393481ENST00000393484ENST00000455989ENST00000461440ENST00000463746ENST00000485009ENST00000492891ENST00000494384ENST00000496871ENST00000496912ENSG00000213167ENST00000392674ENSG00000216076ENST00000401257ENSG00000237813ENST00000439070ENST00000446355ENSG00000237870ENST00000415502ENST00000420594ENST00000454897ENST00000457033ENSG00000243243ENST00000444244ENST00000456289ENSG00000279086ENST00000624389CIL_00063N_0003ENSMUSG00000000058ENSMUST00000000058ENSMUST00000115459ENSMUST00000115462ENSMUSG00000085171ENSMUST00000124434ENSMUST00000125170ENSMUST00000151170ENSMUSG00000085264ENSMUST00000131334
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00063N_0001ENSDARG00000051857ENSDART00000073563ENSDART00000073564ENSDARG00000052000ENSDART00000073726CIL_00063N_0002ENSG00000105971ENST00000222693ENST00000343213ENST00000495841ENSG00000135269ENST00000358204ENST00000393481ENST00000455989ENST00000461440ENST00000463746ENST00000492891ENST00000496912ENSG00000213167ENST00000392674ENSG00000216076ENST00000401257ENSG00000237813ENST00000439070ENSG00000237870ENST00000415502ENST00000420594ENST00000457033ENSG00000243243ENST00000444244ENSG00000279086ENST00000624389CIL_00063N_0003ENSMUSG00000000058ENSMUST00000000058ENSMUST00000115462ENSMUSG00000085171ENSMUST00000124434ENSMUST00000125170ENSMUST00000151170ENSMUSG00000085264ENSMUST00000131334
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000051857 ENSDART00000073563 N/A N/A N/A 0.532±0.34 N/A N/A 6.826±1.62 4.361±1.79 0.342±0.00 N/A N/A N/A N/A N/A
ENSDART00000073564 N/A N/A N/A 1.390±0.00 N/A N/A N/A 0.751±0.00 N/A N/A 2.086±0.00 N/A N/A N/A
ENSDART00000152103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000052000 ENSDART00000073726 N/A N/A N/A 2.587±1.09 N/A N/A 24.074±6.54 4.461±0.31 3.998±0.00 N/A 5.039±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105971 ENST00000222693 32.142±0.00 13.726±0.00 0.307±0.00 2.972±0.00 43.759±40.98 13.354±0.00 12.749±7.03 3.061±2.59 5.178±0.29 27.324±20.74 3.320±0.00 7.619±5.61 24.732±6.04 11.327±6.41
ENST00000343213 N/A N/A N/A N/A N/A 3.919±0.00 34.195±0.00 6.193±0.00 N/A N/A N/A N/A N/A N/A
ENST00000393480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495841 N/A N/A 0.873±0.00 1.477±0.00 7.561±0.00 N/A 25.327±11.03 3.410±0.00 18.841±0.00 N/A 3.528±0.00 9.615±0.00 30.994±0.00 N/A
ENST00000498493 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000135269 ENST00000358204 9.861±0.00 25.357±0.00 2.603±0.00 0.721±0.00 12.776±2.42 28.589±11.40 3.149±1.80 7.245±6.96 11.617±9.97 13.067±4.34 0.076±0.00 18.387±8.80 14.282±4.66 14.731±3.34
ENST00000393481 N/A N/A 1.233±0.00 0.228±0.00 N/A N/A N/A N/A 24.170±0.00 N/A N/A N/A N/A N/A
ENST00000393484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000455989 N/A N/A N/A N/A N/A N/A N/A 0.700±0.00 N/A N/A N/A N/A N/A N/A
ENST00000461440 N/A N/A N/A N/A N/A N/A 0.831±0.00 N/A N/A N/A N/A N/A N/A 24.560±0.00
ENST00000463746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.383±0.00 N/A N/A 28.894±0.00
ENST00000485009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492891 N/A N/A N/A N/A N/A N/A N/A 0.774±0.00 N/A N/A 0.181±0.00 N/A N/A 23.586±0.00
ENST00000494384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496912 N/A N/A N/A 0.630±0.55 N/A N/A 0.915±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000213167 ENST00000392674 0.437±0.00 1.168±0.00 N/A 0.867±0.00 0.949±0.00 0.125±0.00 N/A 0.068±0.00 N/A N/A N/A N/A N/A 0.440±0.28
ENSG00000216076 ENST00000401257 0.443±0.00 0.425±0.00 N/A 0.621±0.00 N/A 0.375±0.00 0.226±0.00 0.397±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000237813 ENST00000439070 0.173±0.00 0.031±0.00 N/A 0.031±0.00 1.112±1.00 N/A 0.176±0.00 N/A 0.067±0.00 0.376±0.00 N/A 0.054±0.03 0.129±0.01 0.288±0.19
ENST00000446355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000237870 ENST00000415502 N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A 1.176±0.00
ENST00000420594 N/A N/A N/A N/A 0.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457033 N/A N/A 0.045±0.00 0.051±0.00 0.113±0.11 0.077±0.00 0.030±0.00 N/A N/A N/A N/A 0.033±0.03 0.037±0.02 0.730±0.57
ENSG00000243243 ENST00000444244 N/A N/A N/A N/A N/A 2.551±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000279086 ENST00000624389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.172±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000058 ENSMUST00000000058 161.512±89.55 48.364±5.69 23.015±12.71 1.585±0.64 104.133±30.60 19.168±1.43 21.767±3.17 27.552±6.09 1.399±0.45 211.252±50.35 7.217±0.56 48.626±20.82 2.413±2.06 2.189±0.90
ENSMUST00000115459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115462 N/A N/A N/A 1.015±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.969±0.00 N/A
ENSMUSG00000085171 ENSMUST00000124434 N/A N/A N/A N/A 0.152±0.00 0.160±0.00 N/A N/A N/A N/A N/A 0.173±0.00 N/A 0.048±0.00
ENSMUST00000125170 N/A 0.659±0.00 N/A 0.040±0.00 0.520±0.00 0.442±0.22 1.159±0.00 N/A 0.077±0.02 N/A 0.219±0.00 0.767±0.40 0.152±0.03 0.197±0.00
ENSMUST00000151170 2.531±1.20 0.234±0.08 2.553±1.21 0.070±0.00 0.908±0.31 0.177±0.12 1.034±0.62 0.132±0.06 0.035±0.02 5.065±0.59 0.531±0.16 0.421±0.17 0.122±0.05 0.116±0.06
ENSMUSG00000085264 ENSMUST00000131334 N/A N/A N/A 0.005±0.00 N/A 0.046±0.00 N/A N/A 0.002±0.00 N/A N/A 0.080±0.01 0.004±0.00 0.014±0.01

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