C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: malignant T cell amplified sequence 2, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394552 MCTS2P-001 ENSG00000101898 9606 + 20:31547504-31548049 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000394552
Transcript ID Ovary
ENST00000394552 9.350±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008K5 CIL_0008K5_0001 VISTA 20:31303913-31904751
CIL_00089Z CIL_00089Z_0001 VISTA 20:31373735-31977079
CIL_0008N4 CIL_0008N4_0001 VISTA 20:31410024-32010895
CIL_0001A0 CIL_0001A0_0001 CGP 20:31475293-31577923

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000365 Mcts1-001 protein_coding Mus_musculus 0 710
ENSMUST00000062148 Mcts2-001 protein_coding Mus_musculus 0 593
ENSMUST00000134573 Mcts1-002 processed_transcript Mus_musculus 0 494
ENSMUST00000120131 Gm12837-001 processed_pseudogene Mus_musculus 0 222
ENSMUST00000148938 Mcts1-005 processed_transcript Mus_musculus 0 206
ENSMUST00000133128 Mcts1-004 processed_transcript Mus_musculus 0 206

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