C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: minichromosome maintenance deficient 7 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000000505 Mcm7-001 ENSMUSG00000029730 10090 - 5:138164583-138172422 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderKidneyLiverPlacentaTestisENSMUST00000000505
Transcript ID Adipose Bladder Kidney Liver Placenta Testis
ENSMUST00000000505 9.169±0.16 11.272±1.47 9.676±1.39 26.675±12.19 12.627±0.00 22.639±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0002 VISTA 5:137705744-138314172
CIL_0002GB CIL_0002GB_0002 CGP 5:138139702-138164646
CIL_0003E2 CIL_0003E2_0002 CGP 5:138161071-138172422
CIL_0003DY CIL_0003DY_0002 CGP 5:138164583-138178708

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003678 IDA DNA helicase activity
GO:0003697 IPI single-stranded DNA binding
GO:0004003 ISS ATP-dependent DNA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0006268 IPI DNA unwinding involved in DNA replication
GO:0006270 IEA DNA replication initiation
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0007049 IEA cell cycle
GO:0008283 IDA cell proliferation
GO:0016020 IEA membrane
GO:0042325 IEA regulation of phosphorylation
GO:0042493 IEA response to drug
GO:0042555 IEA:ISS MCM complex
GO:0071310 IEA cellular response to organic substance
GO:0071364 IEA cellular response to epidermal growth factor stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303887 MCM7-001 protein_coding Homo_sapiens 0 2519
ENST00000343023 MCM7-003 protein_coding Homo_sapiens 0 1153
ENST00000354230 MCM7-201 protein_coding Homo_sapiens 0 2054
ENST00000359593 AP4M1-001 protein_coding Homo_sapiens 3e-20 104
ENST00000394061 AP4M1-009 nonsense_mediated_decay Homo_sapiens 1e-20 104
ENST00000416938 AP4M1-017 nonsense_mediated_decay Homo_sapiens 4e-22 111
ENST00000421755 AP4M1-015 protein_coding Homo_sapiens 3e-20 104
ENST00000425308 MCM7-009 protein_coding Homo_sapiens 0 928
ENST00000429084 AP4M1-006 protein_coding Homo_sapiens 3e-20 104
ENST00000438383 AP4M1-002 protein_coding Homo_sapiens 2e-20 104
ENST00000439416 AP4M1-010 protein_coding Homo_sapiens 2e-20 104
ENST00000445208 AP4M1-003 nonsense_mediated_decay Homo_sapiens 3e-20 104
ENST00000446007 AP4M1-004 nonsense_mediated_decay Homo_sapiens 2e-20 104
ENST00000463195 AP4M1-007 retained_intron Homo_sapiens 1e-26 124
ENST00000463722 MCM7-007 retained_intron Homo_sapiens 0 569
ENST00000477372 MCM7-010 retained_intron Homo_sapiens 0 817
ENST00000478501 AP4M1-011 processed_transcript Homo_sapiens 2e-20 104
ENST00000485286 MCM7-006 retained_intron Homo_sapiens 0 2054
ENST00000489841 MCM7-002 retained_intron Homo_sapiens 0 2054
ENST00000491245 MCM7-005 nonsense_mediated_decay Homo_sapiens 0 664
ENST00000493352 MCM7-014 retained_intron Homo_sapiens 0 401
ENST00000621318 MCM7-202 protein_coding Homo_sapiens 0 2054

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