C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: minichromosome maintenance complex component 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000303887 MCM7-001 ENSG00000166508 9606 - 7:100092781-100101940 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000303887
Transcript ID Adipose Adrenal Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000303887 8.193±0.00 13.216±0.00 3.518±3.03 11.585±0.00 3.913±0.00 7.385±0.00 26.847±0.00 24.909±20.61 15.317±2.81 36.970±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0001 VISTA 7:99696610-100298804
CIL_0003E2 CIL_0003E2_0001 CGP 7:100088954-100101940
CIL_0003DY CIL_0003DY_0001 CGP 7:100092728-100110345

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0000785 TAS chromatin
GO:0003677 TAS:IEA DNA binding
GO:0003678 IEA DNA helicase activity
GO:0003697 IEA single-stranded DNA binding
GO:0004003 IDA ATP-dependent DNA helicase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005829 IEA cytosol
GO:0006260 TAS:IEA DNA replication
GO:0006268 IEA DNA unwinding involved in DNA replication
GO:0006270 IEA DNA replication initiation
GO:0006271 TAS DNA strand elongation involved in DNA replication
GO:0006974 IMP cellular response to DNA damage stimulus
GO:0008283 IEA cell proliferation
GO:0015979 IEA photosynthesis
GO:0015995 IEA chlorophyll biosynthetic process
GO:0016020 IDA membrane
GO:0016851 IEA magnesium chelatase activity
GO:0016887 IEA ATPase activity
GO:0042325 IMP regulation of phosphorylation
GO:0042493 IEA response to drug
GO:0042555 IEA:IMP MCM complex
GO:0071310 IEA cellular response to organic substance
GO:0071364 IEA cellular response to epidermal growth factor stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000505 Mcm7-001 protein_coding Mus_musculus 0 2519
ENSMUST00000148879 Mcm7-002 protein_coding Mus_musculus 0 1094
ENSMUST00000142254 Mcm7-008 retained_intron Mus_musculus 0 797
ENSMUST00000153867 Mcm7-004 protein_coding Mus_musculus 0 787
ENSMUST00000139983 Mcm7-006 protein_coding Mus_musculus 0 699
ENSMUST00000155902 Mcm7-003 protein_coding Mus_musculus 0 697
ENSMUST00000139223 Mcm7-009 processed_transcript Mus_musculus 0 590
ENSMUST00000143241 Ap4m1-002 nonsense_mediated_decay Mus_musculus 4e-16 92
ENSMUST00000157031 Ap4m1-003 retained_intron Mus_musculus 4e-16 92
ENSMUST00000151318 Ap4m1-004 protein_coding Mus_musculus 4e-16 92
ENSMUST00000019662 Ap4m1-001 protein_coding Mus_musculus 4e-16 92

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