C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: charged multivesicular body protein 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000000759 Chmp1a-001 ENSMUSG00000000743 10090 - 8:123204264-123212760 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HA CIL_0008HA_0002 VISTA 8:122617544-123223043
CIL_000334 CIL_000334_0002 CGP 8:123186235-123212763
CIL_000333 CIL_000333_0002 CGP 8:123204264-123222045

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000794 ISS condensed nuclear chromosome
GO:0000910 IEA cytokinesis
GO:0005515 IPI protein binding
GO:0005769 ISS early endosome
GO:0005815 ISS microtubule organizing center
GO:0006351 IEA transcription, DNA-templated
GO:0007076 ISS mitotic chromosome condensation
GO:0012505 ISS endomembrane system
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016192 IEA vesicle-mediated transport
GO:0016363 ISS nuclear matrix
GO:0016458 ISS gene silencing
GO:0019904 IEA protein domain specific binding
GO:0042803 IEA protein homodimerization activity
GO:0045014 IEA negative regulation of transcription by glucose
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397901 CHMP1A-001 protein_coding Homo_sapiens 0 802
ENST00000445563 CHMP1AP1-001 processed_pseudogene Homo_sapiens 0 486
ENST00000535997 CHMP1A-002 protein_coding Homo_sapiens 0 747
ENST00000547614 CHMP1A-010 processed_transcript Homo_sapiens 0 496
ENST00000547687 CHMP1A-004 retained_intron Homo_sapiens 0 259
ENST00000548650 CHMP1A-007 retained_intron Homo_sapiens 0 375
ENST00000549139 CHMP1A-008 retained_intron Homo_sapiens 0 627
ENST00000549328 CHMP1A-009 nonsense_mediated_decay Homo_sapiens 0 551
ENST00000550102 CHMP1A-011 protein_coding Homo_sapiens 0 634
ENST00000550872 CHMP1A-005 retained_intron Homo_sapiens 0 375
ENST00000551981 CHMP1A-006 retained_intron Homo_sapiens 0 551

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