C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: charged multivesicular body protein 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000535997 CHMP1A-002 ENSG00000131165 9606 - 16:89644463-89657709 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000535997
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000535997 13.659±0.00 16.131±0.00 9.385±0.00 5.733±0.00 4.208±0.00 10.275±0.00 5.635±0.00 3.256±0.00 4.455±3.67 9.686±2.18 14.941±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000334 CIL_000334_0001 CGP 16:89613308-89657845
CIL_000333 CIL_000333_0001 CGP 16:89644431-89671272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007034 IEA vacuolar transport
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167655 Chmp1a-003 retained_intron Mus_musculus 0 747
ENSMUST00000000759 Chmp1a-001 protein_coding Mus_musculus 0 747

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