C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005Z2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130675-ENSG00000009335 CGP 9606 7:156994051-157269372
GeneTranscriptPositionBiotype
ENSG00000009335 (UBE3C)
ubiquitin protein ligase E3C 		ENST00000348165 (UBE3C-001) 157138913-157269372 protein_coding
ENST00000389103 (UBE3C-002) 157139195-157189294 protein_coding
ENST00000430750 (UBE3C-005) 157139279-157170450 nonsense_mediated_decay
ENST00000469336 (UBE3C-006) 157207513-157217245 retained_intron
ENST00000470408 (UBE3C-004) 157220668-157269116 retained_intron
ENST00000474153 (UBE3C-009) 157256687-157267676 retained_intron
ENST00000494532 (UBE3C-008) 157225502-157248624 retained_intron
ENST00000497368 (UBE3C-007) 157225500-157231815 retained_intron
ENST00000611269 (UBE3C-201) 157138916-157189296 protein_coding
ENSG00000130675 (MNX1)
motor neuron and pancreas homeobox 1 		ENST00000252971 (MNX1-001) 157004853-157010651 protein_coding
ENST00000425745 (MNX1-005) 157005842-157009287 protein_coding
ENST00000428439 (MNX1-004) 157005842-157009435 protein_coding
ENST00000469500 (MNX1-006) 156994051-157009075 protein_coding
ENST00000474448 (MNX1-007) 157005842-157009435 nonsense_mediated_decay
ENST00000479817 (MNX1-003) 156994051-157009697 protein_coding
ENST00000543409 (MNX1-201) 157004853-157009435 protein_coding
ENST00000605400 (MNX1-008) 157007539-157009291 retained_intron
ENSG00000224629 (RP5-1142J19.2)
 ENST00000428733 (RP5-1142J19.2-001) 157263022-157263229 processed_pseudogene
ENSG00000225224 (RP4-814D15.2)
 ENST00000429552 (RP4-814D15.2-001) 157192368-157192832 processed_pseudogene
ENSG00000229365 (RP4-639J15.2)
 ENST00000467608 (RP4-639J15.2-001) 157087955-157088543 processed_pseudogene
ENSG00000235029 (MNX1-AS2)
MNX1 antisense RNA 2 		ENST00000429228 (MNX1-AS2-001) 157006307-157007132 antisense
ENSG00000236018 (RP4-814D15.1)
 ENST00000451057 (RP4-814D15.1-001) 157197600-157198511 processed_pseudogene
ENSG00000236102 (RP4-639J15.1)
 ENST00000426169 (RP4-639J15.1-001) 157057709-157058514 lincRNA
ENSG00000243479 (MNX1-AS1)
MNX1 antisense RNA 1 (head to head) 		ENST00000480284 (MNX1-AS1-001) 157010805-157016426 lincRNA
ENSG00000269446 (RP4-639J15.3)
 ENST00000594086 (RP4-639J15.3-001) 157109980-157111072 lincRNA
CIL_0005Z2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001566-ENSMUSG00000039000 CGP 10090 5:29473034-29676077
GeneTranscriptPositionBiotype
ENSMUSG00000001566 (Mnx1)
motor neuron and pancreas homeobox 1 		ENSMUST00000001608 (Mnx1-201) 29473261-29478470 protein_coding
ENSMUST00000165512 (Mnx1-001) 29473034-29478470 protein_coding
ENSMUSG00000039000 (Ube3c)
ubiquitin protein ligase E3C 		ENSMUST00000049453 (Ube3c-201) 29569242-29676077 protein_coding
ENSMUSG00000078182 (Gm6083)
predicted gene 6083 		ENSMUST00000075518 (Gm6083-001) 29538153-29538509 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Z2_0001ENSG00000009335ENST00000348165ENST00000389103ENST00000430750ENST00000469336ENST00000470408ENST00000474153ENST00000494532ENST00000497368ENST00000611269ENSG00000130675ENST00000252971ENST00000425745ENST00000428439ENST00000469500ENST00000474448ENST00000479817ENST00000543409ENST00000605400ENSG00000224629ENST00000428733ENSG00000225224ENST00000429552ENSG00000229365ENST00000467608ENSG00000235029ENST00000429228ENSG00000236018ENST00000451057ENSG00000236102ENST00000426169ENSG00000243479ENST00000480284ENSG00000269446ENST00000594086CIL_0005Z2_0002ENSMUSG00000001566ENSMUST00000001608ENSMUST00000165512ENSMUSG00000039000ENSMUST00000049453ENSMUSG00000078182ENSMUST00000075518
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Z2_0001ENSG00000009335ENST00000348165ENSG00000130675ENST00000252971ENST00000543409ENST00000605400ENSG00000224629ENST00000428733ENSG00000225224ENST00000429552ENSG00000229365ENST00000467608ENSG00000235029ENST00000429228ENSG00000236018ENST00000451057ENSG00000236102ENST00000426169ENSG00000243479ENST00000480284ENSG00000269446ENST00000594086CIL_0005Z2_0002ENSMUSG00000001566ENSMUST00000001608ENSMUST00000165512ENSMUSG00000039000ENSMUST00000049453ENSMUSG00000078182ENSMUST00000075518
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000009335 ENST00000348165 12.691±0.00 5.807±0.00 1.770±0.00 9.142±0.11 12.291±2.69 11.697±0.96 9.812±4.20 7.811±3.73 8.019±3.31 6.574±0.95 14.300±1.69 12.150±5.32 5.441±5.17 21.851±3.47
ENST00000389103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000130675 ENST00000252971 N/A N/A N/A N/A 0.112±0.00 0.472±0.16 N/A 0.177±0.00 N/A N/A 0.050±0.00 3.098±2.35 0.251±0.00 0.552±0.16
ENST00000425745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543409 N/A N/A N/A N/A N/A 0.121±0.00 N/A N/A N/A N/A N/A 1.328±0.46 0.180±0.00 0.400±0.01
ENST00000605400 N/A N/A N/A N/A 0.174±0.00 0.252±0.16 N/A N/A N/A N/A N/A 0.581±0.20 N/A 0.113±0.00
ENSG00000224629 ENST00000428733 N/A 0.343±0.00 2.883±0.00 0.088±0.00 0.435±0.00 N/A N/A 0.411±0.23 1.952±1.70 N/A N/A 1.545±1.19 N/A 0.172±0.06
ENSG00000225224 ENST00000429552 0.114±0.00 0.121±0.00 1.470±0.00 0.206±0.06 0.400±0.28 0.511±0.29 0.204±0.15 0.270±0.00 0.222±0.00 0.503±0.47 N/A 0.659±0.42 0.321±0.00 0.877±0.77
ENSG00000229365 ENST00000467608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.541±0.00
ENSG00000235029 ENST00000429228 N/A 0.079±0.00 N/A N/A N/A N/A N/A N/A 0.152±0.00 N/A 0.647±0.00 N/A N/A 0.225±0.00
ENSG00000236018 ENST00000451057 0.062±0.00 0.032±0.00 N/A N/A 0.422±0.36 0.377±0.00 N/A 0.591±0.00 0.374±0.32 N/A N/A 0.056±0.00 0.034±0.00 0.058±0.00
ENSG00000236102 ENST00000426169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.719±0.11
ENSG00000243479 ENST00000480284 0.053±0.00 N/A N/A N/A 0.123±0.00 0.056±0.00 N/A N/A N/A N/A N/A 1.575±1.18 N/A 0.713±0.05
ENSG00000269446 ENST00000594086 0.060±0.00 0.185±0.00 N/A 0.052±0.00 0.048±0.00 0.250±0.14 0.060±0.00 0.031±0.00 N/A 0.069±0.00 N/A 0.036±0.00 N/A 0.332±0.20
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001566 ENSMUST00000001608 N/A N/A N/A 0.043±0.00 N/A 0.250±0.00 N/A N/A 0.005±0.00 0.012±0.00 N/A N/A 0.026±0.01 0.262±0.07
ENSMUST00000165512 N/A N/A N/A 0.015±0.00 N/A 0.867±0.27 N/A N/A N/A N/A N/A N/A 0.102±0.07 0.293±0.00
ENSMUSG00000039000 ENSMUST00000049453 11.219±1.78 9.343±1.35 8.849±0.54 12.188±3.08 7.036±2.27 9.296±0.95 8.591±0.30 9.619±0.33 7.127±1.81 8.831±0.85 10.742±0.46 12.492±1.79 10.546±2.98 10.612±7.19
ENSMUSG00000078182 ENSMUST00000075518 0.180±0.00 N/A 0.040±0.00 0.039±0.00 N/A 0.517±0.15 N/A N/A N/A N/A N/A 0.645±0.37 0.286±0.00 N/A

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