C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001801 Tcirg1-001 ENSMUSG00000001750 10090 - 19:3896050-3907133 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001801
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001801 23.543±5.46 37.326±1.36 20.666±8.32 7.864±0.00 36.223±9.02 32.762±4.71 5.805±2.66 12.688±1.39 25.778±5.89 31.936±2.69 1.436±0.44 25.905±12.59 9.280±4.92 1.537±0.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000220 IEA vacuolar proton-transporting V-type ATPase, V0 domain
GO:0005739 IDA mitochondrion
GO:0005886 IDA plasma membrane
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265686 TCIRG1-001 protein_coding Homo_sapiens 0 2298
ENST00000524598 TCIRG1-011 protein_coding Homo_sapiens 0 793
ENST00000525724 TCIRG1-009 retained_intron Homo_sapiens 0 1635
ENST00000527530 TCIRG1-013 retained_intron Homo_sapiens 0 339
ENST00000529364 TCIRG1-014 protein_coding Homo_sapiens 0 545
ENST00000529657 TCIRG1-002 protein_coding Homo_sapiens 0 575
ENST00000530449 TCIRG1-006 retained_intron Homo_sapiens 0 196
ENST00000532635 TCIRG1-016 protein_coding Homo_sapiens 0 1875
ENST00000533005 TCIRG1-004 retained_intron Homo_sapiens 0 867
ENST00000534673 TCIRG1-010 nonsense_mediated_decay Homo_sapiens 0 427

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