C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000001750 Tcirg1 10090 - 19:3896050-3907133 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000001801 Tcirg1-001 3896050-3907133 protein_coding
  ENSMUST00000122885 Tcirg1-008 3896270-3902023 nonsense_mediated_decay
  ENSMUST00000125792 Tcirg1-007 3902494-3907040 retained_intron
  ENSMUST00000126070 Tcirg1-002 3896050-3906991 protein_coding
  ENSMUST00000126643 Tcirg1-009 3898207-3898853 retained_intron
  ENSMUST00000127308 Tcirg1-006 3902694-3904421 retained_intron
  ENSMUST00000131327 Tcirg1-005 3896050-3903072 retained_intron
  ENSMUST00000132164 Tcirg1-011 3898736-3903355 nonsense_mediated_decay
  ENSMUST00000134698 Tcirg1-010 3897071-3897831 retained_intron
  ENSMUST00000135070 Tcirg1-004 3896050-3907112 nonsense_mediated_decay
  ENSMUST00000145791 Tcirg1-003 3896050-3905230 protein_coding
  ENSMUST00000159824 Tcirg1-013 3902243-3903246 retained_intron
  ENSMUST00000162688 Tcirg1-012 3896400-3897230 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001801ENSMUST00000122885ENSMUST00000125792ENSMUST00000126070ENSMUST00000127308ENSMUST00000131327ENSMUST00000135070ENSMUST00000145791ENSMUST00000162688
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001801 23.543±5.46 37.326±1.36 20.666±8.32 7.864±0.00 36.223±9.02 32.762±4.71 5.805±2.66 12.688±1.39 25.778±5.89 31.936±2.69 1.436±0.44 25.905±12.59 9.280±4.92 1.537±0.34
ENSMUST00000122885 N/A 23.688±1.66 N/A 1.102±0.00 N/A N/A N/A 7.851±0.00 12.771±0.00 N/A 1.394±0.30 11.766±5.78 3.360±0.17 1.247±0.00
ENSMUST00000125792 N/A N/A N/A 4.065±0.00 N/A N/A N/A N/A N/A N/A N/A 24.051±0.00 8.532±0.90 N/A
ENSMUST00000126070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.384±0.05 3.892±0.00 N/A 0.132±0.00
ENSMUST00000127308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.560±0.00
ENSMUST00000131327 14.005±1.67 10.825±0.69 8.972±2.50 3.087±0.00 17.106±3.59 12.999±2.87 1.362±0.00 4.249±0.07 7.839±2.62 14.147±2.10 0.826±0.23 13.235±4.39 5.192±0.72 0.862±0.33
ENSMUST00000135070 N/A N/A N/A 0.821±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.843±0.00 N/A
ENSMUST00000162688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.761±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000220 IEA vacuolar proton-transporting V-type ATPase, V0 domain
GO:0005739 IDA mitochondrion
GO:0005765 IEA lysosomal membrane
GO:0005886 IDA plasma membrane
GO:0015078 IEA hydrogen ion transmembrane transporter activity
GO:0015991 IEA ATP hydrolysis coupled proton transport
GO:0016324 IEA apical plasma membrane
GO:0033179 IEA proton-transporting V-type ATPase, V0 domain

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016835 tcirg1 T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 protein_coding Danio_rerio
ENSDARG00000076003 TCIRG1 (2 of 2) T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 protein_coding Danio_rerio
ENSG00000110719 TCIRG1 T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 protein_coding Homo_sapiens

Loading