C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calpain, small subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001845 Capns1-001 ENSMUSG00000001794 10090 - 7:30186942-30195164 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000001845
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000001845 138.583±16.26 215.627±28.46 64.364±14.03 35.360±3.85 101.784±22.96 95.016±13.16 101.918±4.10 83.030±13.61 37.847±14.36 106.733±6.46 10.989±0.00 85.816±25.44 72.914±12.85 36.661±7.55

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004198 IMP calcium-dependent cysteine-type endopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005737 IBA cytoplasm
GO:0005829 IEA cytosol
GO:0005886 IEA plasma membrane
GO:0006508 IBA proteolysis
GO:0016020 IEA membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000246533 CAPNS1-001 protein_coding Homo_sapiens 0 1046
ENST00000586851 CAPNS1-012 protein_coding Homo_sapiens 0 542
ENST00000586963 CAPNS1-010 protein_coding Homo_sapiens 0 588
ENST00000587718 CAPNS1-003 protein_coding Homo_sapiens 0 928
ENST00000588780 CAPNS1-007 protein_coding Homo_sapiens 0 534
ENST00000588815 CAPNS1-002 protein_coding Homo_sapiens 0 1000
ENST00000589146 CAPNS1-004 protein_coding Homo_sapiens 0 333
ENST00000589162 CAPNS1-014 retained_intron Homo_sapiens 0 320
ENST00000590049 CAPNS1-011 non_stop_decay Homo_sapiens 0 695
ENST00000590874 CAPNS1-008 protein_coding Homo_sapiens 0 638
ENST00000591041 CAPNS1-006 protein_coding Homo_sapiens 0 593
ENST00000592354 CAPNS1-009 protein_coding Homo_sapiens 0 529

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