C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calpain, small subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000590049 CAPNS1-011 ENSG00000126247 9606 + 19:36141159-36150353 non_stop_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000590049
Transcript ID Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000590049 10.419±0.00 8.400±0.00 3.442±0.00 7.749±0.00 10.750±0.00 6.943±0.00 91.172±82.40 112.663±0.00 60.131±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0006508 IEA proteolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126116 Capns1-004 protein_coding Mus_musculus 0 695
ENSMUST00000001845 Capns1-001 protein_coding Mus_musculus 0 695
ENSMUST00000108196 Capns1-002 protein_coding Mus_musculus 0 612
ENSMUST00000129761 Capns1-005 processed_transcript Mus_musculus 0 608
ENSMUST00000141851 Capns1-006 processed_transcript Mus_musculus 0 462

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