C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mediator complex subunit 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000002756 Med6-201 ENSMUSG00000002679 10090 - 12:81573565-81594958 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartLiverMuscleOvaryPlacentaENSMUST00000002756
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Liver Muscle Ovary Placenta
ENSMUST00000002756 1.885±0.69 0.466±0.08 8.744±0.33 6.618±1.36 1.871±0.32 1.360±0.27 10.190±5.38 3.548±0.84 11.010±6.70 24.777±5.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WZ CIL_0002WZ_0003 CGP 12:81573557-81664941

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0003677 IDA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0016592 ISO mediator complex
GO:0019827 IMP stem cell maintenance

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256379 MED6-001 protein_coding Homo_sapiens 0 1014
ENST00000430055 MED6-004 protein_coding Homo_sapiens 0 917
ENST00000439659 MED6P1-001 processed_pseudogene Homo_sapiens 0 228
ENST00000440435 MED6-002 protein_coding Homo_sapiens 0 684
ENST00000553523 MED6-011 retained_intron Homo_sapiens 0 364
ENST00000553611 MED6-006 retained_intron Homo_sapiens 0 595
ENST00000554870 MED6-003 retained_intron Homo_sapiens 0 516
ENST00000554963 MED6-012 protein_coding Homo_sapiens 0 1009
ENST00000555296 MED6-010 retained_intron Homo_sapiens 0 335
ENST00000556044 MED6-007 processed_transcript Homo_sapiens 0 787
ENST00000556423 MED6-008 retained_intron Homo_sapiens 0 396
ENST00000556495 MED6-005 retained_intron Homo_sapiens 0 684
ENST00000615788 MED6-201 protein_coding Homo_sapiens 0 1007

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