C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002WZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000034734-ENSDARG00000074363 CGP 7955 13:36536721-36555171
GeneTranscriptPositionBiotype
ENSDARG00000034734 (med6)
mediator complex subunit 6 		ENSDART00000044115 (med6-001) 36536721-36543085 protein_coding
ENSDART00000133072 (med6-002) 36537015-36542950 nonsense_mediated_decay
ENSDARG00000074363 (TTC9)
tetratricopeptide repeat domain 9 		ENSDART00000140301 (TTC9-001) 36548014-36555171 protein_coding
CIL_0002WZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000133997-ENSG00000133985 CGP 9606 14:70581257-70675360
GeneTranscriptPositionBiotype
ENSG00000133985 (TTC9)
tetratricopeptide repeat domain 9 		ENST00000256367 (TTC9-001) 70641787-70675360 protein_coding
ENSG00000133997 (MED6)
mediator complex subunit 6 		ENST00000256379 (MED6-001) 70583589-70600667 protein_coding
ENST00000430055 (MED6-004) 70584086-70600655 protein_coding
ENST00000440435 (MED6-002) 70584525-70600655 protein_coding
ENST00000553523 (MED6-011) 70596212-70597830 retained_intron
ENST00000553611 (MED6-006) 70591266-70600666 retained_intron
ENST00000554870 (MED6-003) 70592578-70600655 retained_intron
ENST00000554963 (MED6-012) 70581257-70600643 protein_coding
ENST00000555296 (MED6-010) 70584665-70591814 retained_intron
ENST00000556044 (MED6-007) 70591288-70600653 processed_transcript
ENST00000556423 (MED6-008) 70596212-70600653 retained_intron
ENST00000556495 (MED6-005) 70592511-70600664 retained_intron
ENST00000615788 (MED6-201) 70583221-70600690 protein_coding
ENSG00000258951 (KRT18P7)
keratin 18 pseudogene 7 		ENST00000557241 (KRT18P7-001) 70594552-70595770 processed_pseudogene
CIL_0002WZ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000002679-ENSMUSG00000042734 CGP 10090 12:81573557-81664941
GeneTranscriptPositionBiotype
ENSMUSG00000002679 (Med6)
mediator complex subunit 6 		ENSMUST00000002756 (Med6-201) 81573565-81594958 protein_coding
ENSMUST00000159187 (Med6-003) 81581678-81595008 retained_intron
ENSMUST00000160739 (Med6-005) 81573696-81574746 retained_intron
ENSMUST00000161211 (Med6-001) 81573557-81595006 protein_coding
ENSMUST00000161598 (Med6-004) 81573560-81594963 protein_coding
ENSMUST00000161902 (Med6-002) 81579603-81593949 protein_coding
ENSMUSG00000042734 (Ttc9)
tetratricopeptide repeat domain 9 		ENSMUST00000036116 (Ttc9-201) 81631369-81664941 protein_coding
ENSMUSG00000089806 (Gm16570)
predicted gene 16570 		ENSMUST00000161951 (Gm16570-001) 81589435-81589870 processed_pseudogene
ENSMUSG00000090244 (Gm16572)
predicted gene 16572 		ENSMUST00000160258 (Gm16572-001) 81587799-81589640 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002WZ_0001ENSDARG00000034734ENSDART00000044115ENSDART00000133072ENSDARG00000074363ENSDART00000140301CIL_0002WZ_0002ENSG00000133985ENST00000256367ENSG00000133997ENST00000256379ENST00000430055ENST00000440435ENST00000553523ENST00000553611ENST00000554870ENST00000554963ENST00000555296ENST00000556044ENST00000556423ENST00000556495ENST00000615788ENSG00000258951ENST00000557241CIL_0002WZ_0003ENSMUSG00000002679ENSMUST00000002756ENSMUST00000159187ENSMUST00000160739ENSMUST00000161211ENSMUST00000161598ENSMUST00000161902ENSMUSG00000042734ENSMUST00000036116ENSMUSG00000089806ENSMUST00000161951ENSMUSG00000090244ENSMUST00000160258
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002WZ_0001ENSDARG00000034734ENSDART00000044115ENSDART00000133072ENSDARG00000074363ENSDART00000140301CIL_0002WZ_0002ENSG00000133985ENST00000256367ENSG00000133997ENST00000256379ENST00000430055ENST00000440435ENST00000553611ENST00000554870ENST00000554963ENST00000555296ENST00000556044ENST00000556423ENST00000556495ENST00000615788ENSG00000258951ENST00000557241CIL_0002WZ_0003ENSMUSG00000002679ENSMUST00000002756ENSMUST00000159187ENSMUST00000160739ENSMUST00000161211ENSMUST00000161598ENSMUST00000161902ENSMUSG00000042734ENSMUST00000036116ENSMUSG00000089806ENSMUST00000161951ENSMUSG00000090244ENSMUST00000160258
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000034734 ENSDART00000044115 N/A N/A N/A 4.903±4.35 N/A N/A 7.574±2.22 15.862±3.59 1.362±0.00 N/A 5.121±0.00 N/A N/A N/A
ENSDART00000133072 N/A N/A N/A 0.153±0.00 N/A N/A 1.729±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000074363 ENSDART00000140301 N/A N/A N/A 17.626±13.70 N/A N/A 0.166±0.05 0.257±0.11 N/A N/A 1.337±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133985 ENST00000256367 0.451±0.00 3.831±0.00 0.201±0.00 3.709±1.35 0.597±0.36 0.264±0.11 0.337±0.23 0.572±0.55 0.149±0.07 1.352±0.54 2.052±0.00 1.607±1.65 4.915±2.29 0.716±0.06
ENSG00000133997 ENST00000256379 N/A N/A N/A 1.257±0.00 0.618±0.00 N/A 0.528±0.00 N/A 0.820±0.00 N/A N/A 1.896±0.40 1.477±0.05 2.073±0.36
ENST00000430055 1.152±0.00 4.891±0.00 N/A 2.501±0.52 2.591±0.58 1.461±0.10 3.329±0.00 2.268±0.99 1.713±0.44 2.138±0.80 3.058±0.67 2.532±0.63 5.182±1.64 4.044±0.05
ENST00000440435 2.377±0.00 6.562±0.00 0.836±0.00 3.855±0.00 3.201±0.00 2.394±0.00 N/A 1.617±0.00 1.957±0.00 2.615±0.23 3.221±0.00 8.019±0.00 10.073±0.00 6.123±2.15
ENST00000553523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553611 N/A N/A 2.968±0.00 N/A 8.384±0.00 N/A N/A N/A 5.182±0.00 6.850±0.00 3.870±0.00 13.443±0.00 N/A N/A
ENST00000554870 N/A N/A 0.921±0.00 N/A N/A 2.040±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554963 N/A N/A N/A 2.225±0.17 2.591±0.20 1.841±0.00 1.148±0.26 1.778±0.00 2.529±0.00 N/A 4.350±0.00 2.447±0.00 2.395±0.00 3.651±0.00
ENST00000555296 N/A N/A 0.804±0.00 N/A N/A N/A N/A N/A 1.526±0.00 N/A N/A N/A N/A N/A
ENST00000556044 2.586±0.00 N/A 2.631±0.00 18.706±0.00 N/A 6.143±0.00 2.282±0.00 5.468±0.00 N/A 3.735±0.00 N/A 16.383±0.00 N/A N/A
ENST00000556423 N/A N/A N/A N/A N/A N/A 1.370±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000556495 N/A N/A N/A N/A N/A N/A N/A N/A 4.376±0.00 N/A N/A 5.098±0.00 N/A N/A
ENST00000615788 N/A N/A N/A N/A N/A 0.932±0.25 N/A N/A N/A N/A 0.676±0.00 N/A N/A N/A
ENSG00000258951 ENST00000557241 0.015±0.00 N/A N/A 0.121±0.01 0.144±0.00 N/A 0.015±0.00 N/A N/A 0.107±0.00 N/A 0.047±0.01 0.024±0.00 0.150±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002679 ENSMUST00000002756 1.885±0.69 0.466±0.08 8.744±0.33 6.618±1.36 N/A 1.871±0.32 1.360±0.27 N/A 10.190±5.38 N/A 3.548±0.84 11.010±6.70 24.777±5.98 N/A
ENSMUST00000159187 3.429±0.52 1.372±0.58 N/A N/A 1.899±1.05 1.711±0.59 1.330±0.25 1.329±0.00 3.201±2.34 2.020±0.61 N/A 3.366±1.51 N/A 2.145±0.00
ENSMUST00000160739 N/A N/A N/A 7.703±0.00 N/A 2.803±0.57 N/A N/A 2.136±0.43 N/A N/A 8.659±5.84 19.902±0.51 4.556±0.00
ENSMUST00000161211 2.127±0.07 N/A 6.508±1.72 8.167±3.88 0.944±0.00 1.448±0.00 1.989±0.63 3.679±0.59 8.137±5.33 2.767±0.86 1.426±1.00 2.210±1.74 14.160±10.78 4.909±0.64
ENSMUST00000161598 0.914±0.00 0.752±0.02 N/A N/A 2.047±0.90 1.218±0.37 N/A N/A 1.573±0.36 N/A N/A 1.247±0.00 N/A N/A
ENSMUST00000161902 1.932±0.44 1.315±0.67 N/A N/A 2.135±1.77 1.512±0.44 1.301±0.00 2.088±0.09 N/A 1.246±0.00 1.662±0.42 2.983±2.00 7.878±0.00 1.936±0.45
ENSMUSG00000042734 ENSMUST00000036116 1.319±0.69 0.553±0.09 2.472±0.28 2.929±0.00 0.992±0.36 0.632±0.13 0.689±0.22 0.390±0.11 0.057±0.06 6.725±0.41 2.412±0.51 3.548±0.57 2.576±3.09 10.893±3.84
ENSMUSG00000089806 ENSMUST00000161951 0.129±0.00 0.319±0.00 0.596±0.22 0.636±0.11 0.359±0.00 0.387±0.12 0.239±0.01 0.273±0.02 0.177±0.13 0.587±0.19 0.158±0.01 0.426±0.19 0.454±0.24 0.343±0.16
ENSMUSG00000090244 ENSMUST00000160258 N/A N/A N/A 0.524±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.948±0.00 0.666±0.00

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